RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
SEMA6A-201ENST00000257414 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
SEMA6A-201ENST00000257414 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
SEMA6A-201ENST00000257414 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
SEMA6A-201ENST00000257414 MT1MQ8N339 61 aa3.2□□□□□ -1.9
SEMA6A-201ENST00000257414 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
SEMA6A-201ENST00000257414 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SEMA6A-201ENST00000257414 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
SEMA6A-201ENST00000257414 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
SEMA6A-201ENST00000257414 SPRR2EP22531 72 aa3.04□□□□□ -1.92
SEMA6A-201ENST00000257414 SPRR2BP35325 72 aa3.04□□□□□ -1.92
SEMA6A-201ENST00000257414 SPRR2AP35326 72 aa3.04□□□□□ -1.92
SEMA6A-201ENST00000257414 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
SEMA6A-201ENST00000257414 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
SEMA6A-201ENST00000257414 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
SEMA6A-201ENST00000257414 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
SEMA6A-201ENST00000257414 SSPOA2VEC9 5147 aa3□□□□□ -1.93
SEMA6A-201ENST00000257414 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
SEMA6A-201ENST00000257414 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
SEMA6A-201ENST00000257414 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
SEMA6A-201ENST00000257414 MT1AP04731 61 aa2.91□□□□□ -1.94
SEMA6A-201ENST00000257414 SPRR2DP22532 72 aa2.91□□□□□ -1.94
SEMA6A-201ENST00000257414 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.94
SEMA6A-201ENST00000257414 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
SEMA6A-201ENST00000257414 PRM1P04553 51 aa2.89□□□□□ -1.95
SEMA6A-201ENST00000257414 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
SEMA6A-201ENST00000257414 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
SEMA6A-201ENST00000257414 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
SEMA6A-201ENST00000257414 MT3P25713 68 aa2.79□□□□□ -1.96
SEMA6A-201ENST00000257414 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
SEMA6A-201ENST00000257414 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SEMA6A-201ENST00000257414 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
SEMA6A-201ENST00000257414 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
SEMA6A-201ENST00000257414 MT4P47944 62 aa2.61□□□□□ -1.99
SEMA6A-201ENST00000257414 KRTAP5-9P26371 169 aa2.58□□□□□ -2
SEMA6A-201ENST00000257414 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
SEMA6A-201ENST00000257414 MDN1Q9NU22 5596 aa2.57□□□□□ -2
SEMA6A-201ENST00000257414 NEBP20929 6669 aa2.55□□□□□ -2
SEMA6A-201ENST00000257414 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
SEMA6A-201ENST00000257414 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
SEMA6A-201ENST00000257414 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SEMA6A-201ENST00000257414 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
SEMA6A-201ENST00000257414 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
SEMA6A-201ENST00000257414 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.04
SEMA6A-201ENST00000257414 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
SEMA6A-201ENST00000257414 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SEMA6A-201ENST00000257414 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SEMA6A-201ENST00000257414 KRTAP4-11Q9BYQ6 195 aa2.17□□□□□ -2.06
SEMA6A-201ENST00000257414 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SEMA6A-201ENST00000257414 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SEMA6A-201ENST00000257414 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
SEMA6A-201ENST00000257414 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
SEMA6A-201ENST00000257414 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SEMA6A-201ENST00000257414 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
SEMA6A-201ENST00000257414 KRTAP9-9Q9BYP9 154 aa1.98□□□□□ -2.09
SEMA6A-201ENST00000257414 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
SEMA6A-201ENST00000257414 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
SEMA6A-201ENST00000257414 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
SEMA6A-201ENST00000257414 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.1
SEMA6A-201ENST00000257414 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
SEMA6A-201ENST00000257414 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
SEMA6A-201ENST00000257414 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
SEMA6A-201ENST00000257414 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
SEMA6A-201ENST00000257414 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
SEMA6A-201ENST00000257414 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SEMA6A-201ENST00000257414 KRTAP5-8O75690 187 aa1.65□□□□□ -2.14
SEMA6A-201ENST00000257414 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
SEMA6A-201ENST00000257414 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
SEMA6A-201ENST00000257414 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
SEMA6A-201ENST00000257414 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SEMA6A-201ENST00000257414 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SEMA6A-201ENST00000257414 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 39.9 ms