RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
VHL-201ENST00000256474 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
VHL-201ENST00000256474 MT1LQ93083 61 aa4.61□□□□□ -1.67
VHL-201ENST00000256474 MT1EP04732 61 aa4.59□□□□□ -1.68
VHL-201ENST00000256474 MT1GP13640 62 aa4.55□□□□□ -1.68
VHL-201ENST00000256474 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
VHL-201ENST00000256474 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
VHL-201ENST00000256474 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
VHL-201ENST00000256474 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
VHL-201ENST00000256474 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
VHL-201ENST00000256474 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
VHL-201ENST00000256474 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
VHL-201ENST00000256474 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
VHL-201ENST00000256474 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
VHL-201ENST00000256474 MT1MQ8N339 61 aa4.31□□□□□ -1.72
VHL-201ENST00000256474 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
VHL-201ENST00000256474 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
VHL-201ENST00000256474 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
VHL-201ENST00000256474 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
VHL-201ENST00000256474 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
VHL-201ENST00000256474 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
VHL-201ENST00000256474 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
VHL-201ENST00000256474 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
VHL-201ENST00000256474 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
VHL-201ENST00000256474 SPRR2EP22531 72 aa3.91□□□□□ -1.78
VHL-201ENST00000256474 SPRR2BP35325 72 aa3.91□□□□□ -1.78
VHL-201ENST00000256474 SPRR2AP35326 72 aa3.91□□□□□ -1.78
VHL-201ENST00000256474 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
VHL-201ENST00000256474 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
VHL-201ENST00000256474 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
VHL-201ENST00000256474 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
VHL-201ENST00000256474 PRM1P04553 51 aa3.82□□□□□ -1.8
VHL-201ENST00000256474 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
VHL-201ENST00000256474 MT1AP04731 61 aa3.8□□□□□ -1.8
VHL-201ENST00000256474 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
VHL-201ENST00000256474 SPRR2DP22532 72 aa3.71□□□□□ -1.82
VHL-201ENST00000256474 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
VHL-201ENST00000256474 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
VHL-201ENST00000256474 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
VHL-201ENST00000256474 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
VHL-201ENST00000256474 NEBP20929 6669 aa3.56□□□□□ -1.84
VHL-201ENST00000256474 MT3P25713 68 aa3.49□□□□□ -1.85
VHL-201ENST00000256474 MT4P47944 62 aa3.47□□□□□ -1.85
VHL-201ENST00000256474 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
VHL-201ENST00000256474 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
VHL-201ENST00000256474 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
VHL-201ENST00000256474 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
VHL-201ENST00000256474 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
VHL-201ENST00000256474 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
VHL-201ENST00000256474 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
VHL-201ENST00000256474 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
VHL-201ENST00000256474 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
VHL-201ENST00000256474 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
VHL-201ENST00000256474 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.92
VHL-201ENST00000256474 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
VHL-201ENST00000256474 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
VHL-201ENST00000256474 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
VHL-201ENST00000256474 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
VHL-201ENST00000256474 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
VHL-201ENST00000256474 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
VHL-201ENST00000256474 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
VHL-201ENST00000256474 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
VHL-201ENST00000256474 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
VHL-201ENST00000256474 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
VHL-201ENST00000256474 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
VHL-201ENST00000256474 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
VHL-201ENST00000256474 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
VHL-201ENST00000256474 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
VHL-201ENST00000256474 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
VHL-201ENST00000256474 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
VHL-201ENST00000256474 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
VHL-201ENST00000256474 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
VHL-201ENST00000256474 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
VHL-201ENST00000256474 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
VHL-201ENST00000256474 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
VHL-201ENST00000256474 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
VHL-201ENST00000256474 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms