RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
PDE6B-201ENST00000255622 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
PDE6B-201ENST00000255622 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
PDE6B-201ENST00000255622 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
PDE6B-201ENST00000255622 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
PDE6B-201ENST00000255622 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
PDE6B-201ENST00000255622 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
PDE6B-201ENST00000255622 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
PDE6B-201ENST00000255622 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
PDE6B-201ENST00000255622 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
PDE6B-201ENST00000255622 MT1GP13640 62 aa3.66□□□□□ -1.82
PDE6B-201ENST00000255622 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
PDE6B-201ENST00000255622 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
PDE6B-201ENST00000255622 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
PDE6B-201ENST00000255622 MT1MQ8N339 61 aa3.62□□□□□ -1.83
PDE6B-201ENST00000255622 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
PDE6B-201ENST00000255622 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PDE6B-201ENST00000255622 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
PDE6B-201ENST00000255622 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
PDE6B-201ENST00000255622 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
PDE6B-201ENST00000255622 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
PDE6B-201ENST00000255622 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
PDE6B-201ENST00000255622 PRM1P04553 51 aa3.48□□□□□ -1.85
PDE6B-201ENST00000255622 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
PDE6B-201ENST00000255622 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
PDE6B-201ENST00000255622 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
PDE6B-201ENST00000255622 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
PDE6B-201ENST00000255622 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
PDE6B-201ENST00000255622 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
PDE6B-201ENST00000255622 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
PDE6B-201ENST00000255622 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
PDE6B-201ENST00000255622 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
PDE6B-201ENST00000255622 MT1AP04731 61 aa3.22□□□□□ -1.89
PDE6B-201ENST00000255622 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
PDE6B-201ENST00000255622 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PDE6B-201ENST00000255622 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PDE6B-201ENST00000255622 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PDE6B-201ENST00000255622 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
PDE6B-201ENST00000255622 MT3P25713 68 aa3.17□□□□□ -1.9
PDE6B-201ENST00000255622 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PDE6B-201ENST00000255622 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
PDE6B-201ENST00000255622 SPRR2DP22532 72 aa3.04□□□□□ -1.92
PDE6B-201ENST00000255622 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
PDE6B-201ENST00000255622 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
PDE6B-201ENST00000255622 MT4P47944 62 aa2.8□□□□□ -1.96
PDE6B-201ENST00000255622 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PDE6B-201ENST00000255622 NEBP20929 6669 aa2.77□□□□□ -1.97
PDE6B-201ENST00000255622 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
PDE6B-201ENST00000255622 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
PDE6B-201ENST00000255622 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
PDE6B-201ENST00000255622 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PDE6B-201ENST00000255622 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
PDE6B-201ENST00000255622 MUC5ACP98088 5654 aa2.53□□□□□ -2
PDE6B-201ENST00000255622 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
PDE6B-201ENST00000255622 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
PDE6B-201ENST00000255622 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
PDE6B-201ENST00000255622 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
PDE6B-201ENST00000255622 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
PDE6B-201ENST00000255622 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
PDE6B-201ENST00000255622 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
PDE6B-201ENST00000255622 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PDE6B-201ENST00000255622 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PDE6B-201ENST00000255622 KRTAP5-8O75690 187 aa2.09□□□□□ -2.08
PDE6B-201ENST00000255622 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
PDE6B-201ENST00000255622 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
PDE6B-201ENST00000255622 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
PDE6B-201ENST00000255622 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
PDE6B-201ENST00000255622 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
PDE6B-201ENST00000255622 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
PDE6B-201ENST00000255622 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
PDE6B-201ENST00000255622 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 48.1 ms