RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
PCDHGA3-201ENST00000253812 PRM1P04553 51 aa4.22□□□□□ -1.73
PCDHGA3-201ENST00000253812 MT1LQ93083 61 aa4.2□□□□□ -1.74
PCDHGA3-201ENST00000253812 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
PCDHGA3-201ENST00000253812 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
PCDHGA3-201ENST00000253812 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
PCDHGA3-201ENST00000253812 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
PCDHGA3-201ENST00000253812 MT1EP04732 61 aa4.12□□□□□ -1.75
PCDHGA3-201ENST00000253812 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
PCDHGA3-201ENST00000253812 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.76
PCDHGA3-201ENST00000253812 MT3P25713 68 aa4.03□□□□□ -1.76
PCDHGA3-201ENST00000253812 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
PCDHGA3-201ENST00000253812 MT4P47944 62 aa4.01□□□□□ -1.77
PCDHGA3-201ENST00000253812 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
PCDHGA3-201ENST00000253812 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
PCDHGA3-201ENST00000253812 MT1MQ8N339 61 aa3.97□□□□□ -1.77
PCDHGA3-201ENST00000253812 USH2AO75445 5202 aa3.96□□□□□ -1.78
PCDHGA3-201ENST00000253812 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
PCDHGA3-201ENST00000253812 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
PCDHGA3-201ENST00000253812 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
PCDHGA3-201ENST00000253812 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
PCDHGA3-201ENST00000253812 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
PCDHGA3-201ENST00000253812 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
PCDHGA3-201ENST00000253812 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PCDHGA3-201ENST00000253812 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
PCDHGA3-201ENST00000253812 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
PCDHGA3-201ENST00000253812 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
PCDHGA3-201ENST00000253812 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
PCDHGA3-201ENST00000253812 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
PCDHGA3-201ENST00000253812 MT1AP04731 61 aa3.72□□□□□ -1.81
PCDHGA3-201ENST00000253812 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
PCDHGA3-201ENST00000253812 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
PCDHGA3-201ENST00000253812 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
PCDHGA3-201ENST00000253812 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
PCDHGA3-201ENST00000253812 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
PCDHGA3-201ENST00000253812 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
PCDHGA3-201ENST00000253812 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
PCDHGA3-201ENST00000253812 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
PCDHGA3-201ENST00000253812 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
PCDHGA3-201ENST00000253812 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
PCDHGA3-201ENST00000253812 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
PCDHGA3-201ENST00000253812 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
PCDHGA3-201ENST00000253812 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
PCDHGA3-201ENST00000253812 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
PCDHGA3-201ENST00000253812 NEBP20929 6669 aa3.39□□□□□ -1.87
PCDHGA3-201ENST00000253812 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
PCDHGA3-201ENST00000253812 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
PCDHGA3-201ENST00000253812 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
PCDHGA3-201ENST00000253812 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
PCDHGA3-201ENST00000253812 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
PCDHGA3-201ENST00000253812 KRTAP5-9P26371 169 aa3.21□□□□□ -1.89
PCDHGA3-201ENST00000253812 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
PCDHGA3-201ENST00000253812 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
PCDHGA3-201ENST00000253812 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
PCDHGA3-201ENST00000253812 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
PCDHGA3-201ENST00000253812 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
PCDHGA3-201ENST00000253812 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
PCDHGA3-201ENST00000253812 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PCDHGA3-201ENST00000253812 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
PCDHGA3-201ENST00000253812 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
PCDHGA3-201ENST00000253812 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
PCDHGA3-201ENST00000253812 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
PCDHGA3-201ENST00000253812 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
PCDHGA3-201ENST00000253812 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
PCDHGA3-201ENST00000253812 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PCDHGA3-201ENST00000253812 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PCDHGA3-201ENST00000253812 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
PCDHGA3-201ENST00000253812 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PCDHGA3-201ENST00000253812 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PCDHGA3-201ENST00000253812 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
PCDHGA3-201ENST00000253812 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
PCDHGA3-201ENST00000253812 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
PCDHGA3-201ENST00000253812 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
PCDHGA3-201ENST00000253812 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
PCDHGA3-201ENST00000253812 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PCDHGA3-201ENST00000253812 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
PCDHGA3-201ENST00000253812 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms