RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SYMPK-201ENST00000245934 SPRR2EP22531 72 aa4.4□□□□□ -1.7
SYMPK-201ENST00000245934 SPRR2BP35325 72 aa4.4□□□□□ -1.7
SYMPK-201ENST00000245934 SPRR2AP35326 72 aa4.4□□□□□ -1.7
SYMPK-201ENST00000245934 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
SYMPK-201ENST00000245934 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
SYMPK-201ENST00000245934 MT1LQ93083 61 aa4.3□□□□□ -1.72
SYMPK-201ENST00000245934 MT1EP04732 61 aa4.29□□□□□ -1.72
SYMPK-201ENST00000245934 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
SYMPK-201ENST00000245934 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
SYMPK-201ENST00000245934 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
SYMPK-201ENST00000245934 SPRR2DP22532 72 aa4.21□□□□□ -1.74
SYMPK-201ENST00000245934 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
SYMPK-201ENST00000245934 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
SYMPK-201ENST00000245934 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
SYMPK-201ENST00000245934 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
SYMPK-201ENST00000245934 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
SYMPK-201ENST00000245934 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SYMPK-201ENST00000245934 MT1MQ8N339 61 aa4.12□□□□□ -1.75
SYMPK-201ENST00000245934 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
SYMPK-201ENST00000245934 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
SYMPK-201ENST00000245934 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
SYMPK-201ENST00000245934 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
SYMPK-201ENST00000245934 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SYMPK-201ENST00000245934 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
SYMPK-201ENST00000245934 PRM1P04553 51 aa3.98□□□□□ -1.77
SYMPK-201ENST00000245934 MT4P47944 62 aa3.94□□□□□ -1.78
SYMPK-201ENST00000245934 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SYMPK-201ENST00000245934 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
SYMPK-201ENST00000245934 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
SYMPK-201ENST00000245934 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SYMPK-201ENST00000245934 MT3P25713 68 aa3.7□□□□□ -1.82
SYMPK-201ENST00000245934 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
SYMPK-201ENST00000245934 MT1AP04731 61 aa3.67□□□□□ -1.82
SYMPK-201ENST00000245934 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
SYMPK-201ENST00000245934 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
SYMPK-201ENST00000245934 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
SYMPK-201ENST00000245934 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
SYMPK-201ENST00000245934 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
SYMPK-201ENST00000245934 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
SYMPK-201ENST00000245934 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
SYMPK-201ENST00000245934 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
SYMPK-201ENST00000245934 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SYMPK-201ENST00000245934 NEBP20929 6669 aa3.41□□□□□ -1.86
SYMPK-201ENST00000245934 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
SYMPK-201ENST00000245934 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
SYMPK-201ENST00000245934 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
SYMPK-201ENST00000245934 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
SYMPK-201ENST00000245934 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
SYMPK-201ENST00000245934 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SYMPK-201ENST00000245934 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SYMPK-201ENST00000245934 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
SYMPK-201ENST00000245934 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
SYMPK-201ENST00000245934 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SYMPK-201ENST00000245934 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
SYMPK-201ENST00000245934 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
SYMPK-201ENST00000245934 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
SYMPK-201ENST00000245934 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SYMPK-201ENST00000245934 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
SYMPK-201ENST00000245934 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SYMPK-201ENST00000245934 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
SYMPK-201ENST00000245934 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
SYMPK-201ENST00000245934 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
SYMPK-201ENST00000245934 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
SYMPK-201ENST00000245934 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SYMPK-201ENST00000245934 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
SYMPK-201ENST00000245934 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
SYMPK-201ENST00000245934 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
SYMPK-201ENST00000245934 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
SYMPK-201ENST00000245934 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
SYMPK-201ENST00000245934 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
SYMPK-201ENST00000245934 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SYMPK-201ENST00000245934 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SYMPK-201ENST00000245934 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
SYMPK-201ENST00000245934 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
SYMPK-201ENST00000245934 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SYMPK-201ENST00000245934 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 55.7 ms