RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
COL21A1-201ENST00000244728 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
COL21A1-201ENST00000244728 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
COL21A1-201ENST00000244728 MT1LQ93083 61 aa3.06□□□□□ -1.92
COL21A1-201ENST00000244728 MT1EP04732 61 aa3.05□□□□□ -1.92
COL21A1-201ENST00000244728 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
COL21A1-201ENST00000244728 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
COL21A1-201ENST00000244728 SPRR2DP22532 72 aa3.01□□□□□ -1.93
COL21A1-201ENST00000244728 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
COL21A1-201ENST00000244728 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
COL21A1-201ENST00000244728 KMT2DO14686 5537 aa2.99□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
COL21A1-201ENST00000244728 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
COL21A1-201ENST00000244728 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
COL21A1-201ENST00000244728 MT1MQ8N339 61 aa2.93□□□□□ -1.94
COL21A1-201ENST00000244728 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
COL21A1-201ENST00000244728 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
COL21A1-201ENST00000244728 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
COL21A1-201ENST00000244728 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
COL21A1-201ENST00000244728 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
COL21A1-201ENST00000244728 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
COL21A1-201ENST00000244728 MT4P47944 62 aa2.78□□□□□ -1.96
COL21A1-201ENST00000244728 PRM1P04553 51 aa2.73□□□□□ -1.97
COL21A1-201ENST00000244728 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
COL21A1-201ENST00000244728 MT3P25713 68 aa2.67□□□□□ -1.98
COL21A1-201ENST00000244728 MT1AP04731 61 aa2.64□□□□□ -1.99
COL21A1-201ENST00000244728 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
COL21A1-201ENST00000244728 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
COL21A1-201ENST00000244728 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
COL21A1-201ENST00000244728 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
COL21A1-201ENST00000244728 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
COL21A1-201ENST00000244728 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
COL21A1-201ENST00000244728 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
COL21A1-201ENST00000244728 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
COL21A1-201ENST00000244728 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
COL21A1-201ENST00000244728 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
COL21A1-201ENST00000244728 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
COL21A1-201ENST00000244728 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
COL21A1-201ENST00000244728 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
COL21A1-201ENST00000244728 NEBP20929 6669 aa2.35□□□□□ -2.03
COL21A1-201ENST00000244728 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
COL21A1-201ENST00000244728 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
COL21A1-201ENST00000244728 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
COL21A1-201ENST00000244728 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
COL21A1-201ENST00000244728 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
COL21A1-201ENST00000244728 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
COL21A1-201ENST00000244728 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
COL21A1-201ENST00000244728 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
COL21A1-201ENST00000244728 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
COL21A1-201ENST00000244728 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
COL21A1-201ENST00000244728 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
COL21A1-201ENST00000244728 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
COL21A1-201ENST00000244728 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
COL21A1-201ENST00000244728 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
COL21A1-201ENST00000244728 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
COL21A1-201ENST00000244728 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
COL21A1-201ENST00000244728 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
COL21A1-201ENST00000244728 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
COL21A1-201ENST00000244728 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
COL21A1-201ENST00000244728 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
COL21A1-201ENST00000244728 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
COL21A1-201ENST00000244728 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
COL21A1-201ENST00000244728 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
COL21A1-201ENST00000244728 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
COL21A1-201ENST00000244728 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
COL21A1-201ENST00000244728 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
COL21A1-201ENST00000244728 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
COL21A1-201ENST00000244728 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
COL21A1-201ENST00000244728 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
COL21A1-201ENST00000244728 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
COL21A1-201ENST00000244728 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
COL21A1-201ENST00000244728 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
COL21A1-201ENST00000244728 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 78.4 ms