RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
SSPN-201ENST00000242729 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
SSPN-201ENST00000242729 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
SSPN-201ENST00000242729 MT1GP13640 62 aa5.6□□□□□ -1.51
SSPN-201ENST00000242729 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
SSPN-201ENST00000242729 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
SSPN-201ENST00000242729 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
SSPN-201ENST00000242729 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
SSPN-201ENST00000242729 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SSPN-201ENST00000242729 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
SSPN-201ENST00000242729 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
SSPN-201ENST00000242729 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
SSPN-201ENST00000242729 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
SSPN-201ENST00000242729 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
SSPN-201ENST00000242729 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
SSPN-201ENST00000242729 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.57
SSPN-201ENST00000242729 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
SSPN-201ENST00000242729 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
SSPN-201ENST00000242729 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
SSPN-201ENST00000242729 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
SSPN-201ENST00000242729 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
SSPN-201ENST00000242729 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
SSPN-201ENST00000242729 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
SSPN-201ENST00000242729 SPRR2EP22531 72 aa4.87□□□□□ -1.63
SSPN-201ENST00000242729 SPRR2BP35325 72 aa4.87□□□□□ -1.63
SSPN-201ENST00000242729 SPRR2AP35326 72 aa4.87□□□□□ -1.63
SSPN-201ENST00000242729 MT1AP04731 61 aa4.8□□□□□ -1.64
SSPN-201ENST00000242729 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
SSPN-201ENST00000242729 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
SSPN-201ENST00000242729 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
SSPN-201ENST00000242729 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SSPN-201ENST00000242729 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
SSPN-201ENST00000242729 SPRR2DP22532 72 aa4.64□□□□□ -1.67
SSPN-201ENST00000242729 PRM1P04553 51 aa4.56□□□□□ -1.68
SSPN-201ENST00000242729 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SSPN-201ENST00000242729 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
SSPN-201ENST00000242729 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
SSPN-201ENST00000242729 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
SSPN-201ENST00000242729 MT3P25713 68 aa4.33□□□□□ -1.72
SSPN-201ENST00000242729 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
SSPN-201ENST00000242729 MT4P47944 62 aa4.25□□□□□ -1.73
SSPN-201ENST00000242729 NEBP20929 6669 aa4.19□□□□□ -1.74
SSPN-201ENST00000242729 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
SSPN-201ENST00000242729 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
SSPN-201ENST00000242729 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
SSPN-201ENST00000242729 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SSPN-201ENST00000242729 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
SSPN-201ENST00000242729 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SSPN-201ENST00000242729 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
SSPN-201ENST00000242729 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SSPN-201ENST00000242729 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SSPN-201ENST00000242729 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SSPN-201ENST00000242729 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
SSPN-201ENST00000242729 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
SSPN-201ENST00000242729 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
SSPN-201ENST00000242729 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SSPN-201ENST00000242729 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SSPN-201ENST00000242729 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
SSPN-201ENST00000242729 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
SSPN-201ENST00000242729 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
SSPN-201ENST00000242729 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
SSPN-201ENST00000242729 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SSPN-201ENST00000242729 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SSPN-201ENST00000242729 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
SSPN-201ENST00000242729 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SSPN-201ENST00000242729 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
SSPN-201ENST00000242729 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
SSPN-201ENST00000242729 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.9
SSPN-201ENST00000242729 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
SSPN-201ENST00000242729 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SSPN-201ENST00000242729 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
SSPN-201ENST00000242729 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
SSPN-201ENST00000242729 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SSPN-201ENST00000242729 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
SSPN-201ENST00000242729 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SSPN-201ENST00000242729 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SSPN-201ENST00000242729 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 97.8 ms