RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
COPA-201ENST00000241704 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
COPA-201ENST00000241704 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
COPA-201ENST00000241704 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
COPA-201ENST00000241704 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
COPA-201ENST00000241704 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
COPA-201ENST00000241704 MT1EP04732 61 aa3.66□□□□□ -1.82
COPA-201ENST00000241704 MT1LQ93083 61 aa3.65□□□□□ -1.83
COPA-201ENST00000241704 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
COPA-201ENST00000241704 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
COPA-201ENST00000241704 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
COPA-201ENST00000241704 MT1MQ8N339 61 aa3.5□□□□□ -1.85
COPA-201ENST00000241704 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
COPA-201ENST00000241704 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
COPA-201ENST00000241704 MT4P47944 62 aa3.47□□□□□ -1.85
COPA-201ENST00000241704 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
COPA-201ENST00000241704 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
COPA-201ENST00000241704 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
COPA-201ENST00000241704 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
COPA-201ENST00000241704 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
COPA-201ENST00000241704 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
COPA-201ENST00000241704 MT3P25713 68 aa3.35□□□□□ -1.87
COPA-201ENST00000241704 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
COPA-201ENST00000241704 USH2AO75445 5202 aa3.34□□□□□ -1.87
COPA-201ENST00000241704 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
COPA-201ENST00000241704 PRM1P04553 51 aa3.31□□□□□ -1.88
COPA-201ENST00000241704 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
COPA-201ENST00000241704 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
COPA-201ENST00000241704 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
COPA-201ENST00000241704 MT1AP04731 61 aa3.21□□□□□ -1.89
COPA-201ENST00000241704 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.89
COPA-201ENST00000241704 KMT2DO14686 5537 aa3.2□□□□□ -1.9
COPA-201ENST00000241704 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
COPA-201ENST00000241704 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
COPA-201ENST00000241704 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
COPA-201ENST00000241704 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
COPA-201ENST00000241704 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
COPA-201ENST00000241704 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
COPA-201ENST00000241704 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
COPA-201ENST00000241704 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
COPA-201ENST00000241704 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
COPA-201ENST00000241704 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
COPA-201ENST00000241704 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
COPA-201ENST00000241704 NEBP20929 6669 aa2.97□□□□□ -1.93
COPA-201ENST00000241704 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
COPA-201ENST00000241704 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
COPA-201ENST00000241704 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
COPA-201ENST00000241704 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
COPA-201ENST00000241704 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
COPA-201ENST00000241704 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
COPA-201ENST00000241704 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
COPA-201ENST00000241704 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
COPA-201ENST00000241704 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
COPA-201ENST00000241704 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
COPA-201ENST00000241704 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
COPA-201ENST00000241704 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
COPA-201ENST00000241704 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
COPA-201ENST00000241704 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
COPA-201ENST00000241704 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
COPA-201ENST00000241704 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
COPA-201ENST00000241704 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
COPA-201ENST00000241704 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
COPA-201ENST00000241704 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
COPA-201ENST00000241704 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
COPA-201ENST00000241704 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
COPA-201ENST00000241704 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
COPA-201ENST00000241704 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
COPA-201ENST00000241704 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
COPA-201ENST00000241704 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
COPA-201ENST00000241704 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
COPA-201ENST00000241704 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
COPA-201ENST00000241704 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
COPA-201ENST00000241704 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
COPA-201ENST00000241704 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
COPA-201ENST00000241704 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
COPA-201ENST00000241704 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
COPA-201ENST00000241704 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.2 ms