RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
NEK9-201ENST00000238616 DNHD1Q96M86 4753 aa3.87□□□□□ -1.79
NEK9-201ENST00000238616 RYR1P21817 5038 aa3.8□□□□□ -1.8
NEK9-201ENST00000238616 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
NEK9-201ENST00000238616 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
NEK9-201ENST00000238616 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
NEK9-201ENST00000238616 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
NEK9-201ENST00000238616 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
NEK9-201ENST00000238616 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
NEK9-201ENST00000238616 RYR3Q15413 4870 aa3.59□□□□□ -1.83
NEK9-201ENST00000238616 MT1AP04731 61 aa3.57□□□□□ -1.84
NEK9-201ENST00000238616 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
NEK9-201ENST00000238616 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
NEK9-201ENST00000238616 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
NEK9-201ENST00000238616 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
NEK9-201ENST00000238616 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
NEK9-201ENST00000238616 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
NEK9-201ENST00000238616 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
NEK9-201ENST00000238616 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
NEK9-201ENST00000238616 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
NEK9-201ENST00000238616 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
NEK9-201ENST00000238616 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
NEK9-201ENST00000238616 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
NEK9-201ENST00000238616 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
NEK9-201ENST00000238616 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
NEK9-201ENST00000238616 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
NEK9-201ENST00000238616 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
NEK9-201ENST00000238616 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
NEK9-201ENST00000238616 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
NEK9-201ENST00000238616 HERC2O95714 4834 aa3.11□□□□□ -1.91
NEK9-201ENST00000238616 HERC1Q15751 4861 aa3.09□□□□□ -1.91
NEK9-201ENST00000238616 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.92
NEK9-201ENST00000238616 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NEK9-201ENST00000238616 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
NEK9-201ENST00000238616 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
NEK9-201ENST00000238616 KMT2DO14686 5537 aa2.97□□□□□ -1.93
NEK9-201ENST00000238616 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
NEK9-201ENST00000238616 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
NEK9-201ENST00000238616 RYR2Q92736 4967 aa2.94□□□□□ -1.94
NEK9-201ENST00000238616 MUC2Q02817 5179 aa2.93□□□□□ -1.94
NEK9-201ENST00000238616 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
NEK9-201ENST00000238616 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
NEK9-201ENST00000238616 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
NEK9-201ENST00000238616 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
NEK9-201ENST00000238616 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
NEK9-201ENST00000238616 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
NEK9-201ENST00000238616 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
NEK9-201ENST00000238616 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
NEK9-201ENST00000238616 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
NEK9-201ENST00000238616 KRTAP5-9P26371 169 aa2.53□□□□□ -2
NEK9-201ENST00000238616 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
NEK9-201ENST00000238616 NEBP20929 6669 aa2.46□□□□□ -2.02
NEK9-201ENST00000238616 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
NEK9-201ENST00000238616 RNF213Q63HN8 5207 aa2.4□□□□□ -2.03
NEK9-201ENST00000238616 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
NEK9-201ENST00000238616 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
NEK9-201ENST00000238616 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
NEK9-201ENST00000238616 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.06
NEK9-201ENST00000238616 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
NEK9-201ENST00000238616 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
NEK9-201ENST00000238616 USH2AO75445 5202 aa2.08□□□□□ -2.08
NEK9-201ENST00000238616 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
NEK9-201ENST00000238616 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
NEK9-201ENST00000238616 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
NEK9-201ENST00000238616 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
NEK9-201ENST00000238616 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
NEK9-201ENST00000238616 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
NEK9-201ENST00000238616 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
NEK9-201ENST00000238616 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
NEK9-201ENST00000238616 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
NEK9-201ENST00000238616 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
NEK9-201ENST00000238616 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NEK9-201ENST00000238616 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
NEK9-201ENST00000238616 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.18
NEK9-201ENST00000238616 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
NEK9-201ENST00000238616 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
NEK9-201ENST00000238616 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 66.5 ms