RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
NANOG-201ENST00000229307 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
NANOG-201ENST00000229307 USH2AO75445 5202 aa2.81□□□□□ -1.96
NANOG-201ENST00000229307 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
NANOG-201ENST00000229307 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
NANOG-201ENST00000229307 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
NANOG-201ENST00000229307 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
NANOG-201ENST00000229307 SSPOA2VEC9 5147 aa2.78□□□□□ -1.96
NANOG-201ENST00000229307 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
NANOG-201ENST00000229307 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
NANOG-201ENST00000229307 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
NANOG-201ENST00000229307 MT1EP04732 61 aa2.71□□□□□ -1.98
NANOG-201ENST00000229307 NEBP20929 6669 aa2.71□□□□□ -1.98
NANOG-201ENST00000229307 MT1LQ93083 61 aa2.69□□□□□ -1.98
NANOG-201ENST00000229307 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
NANOG-201ENST00000229307 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
NANOG-201ENST00000229307 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
NANOG-201ENST00000229307 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
NANOG-201ENST00000229307 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
NANOG-201ENST00000229307 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
NANOG-201ENST00000229307 MT1MQ8N339 61 aa2.63□□□□□ -1.99
NANOG-201ENST00000229307 MT3P25713 68 aa2.6□□□□□ -1.99
NANOG-201ENST00000229307 MT4P47944 62 aa2.54□□□□□ -2
NANOG-201ENST00000229307 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
NANOG-201ENST00000229307 KRTAP4-7Q9BYR0 210 aa2.51□□□□□ -2.01
NANOG-201ENST00000229307 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NANOG-201ENST00000229307 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
NANOG-201ENST00000229307 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
NANOG-201ENST00000229307 MT1AP04731 61 aa2.43□□□□□ -2.02
NANOG-201ENST00000229307 LCE5AQ5TCM9 118 aa2.42□□□□□ -2.02
NANOG-201ENST00000229307 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
NANOG-201ENST00000229307 KMT2DO14686 5537 aa2.39□□□□□ -2.03
NANOG-201ENST00000229307 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
NANOG-201ENST00000229307 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
NANOG-201ENST00000229307 KRTAP4-9Q9BYQ8 210 aa2.34□□□□□ -2.04
NANOG-201ENST00000229307 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
NANOG-201ENST00000229307 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
NANOG-201ENST00000229307 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
NANOG-201ENST00000229307 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
NANOG-201ENST00000229307 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
NANOG-201ENST00000229307 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.05
NANOG-201ENST00000229307 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
NANOG-201ENST00000229307 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
NANOG-201ENST00000229307 PRM1P04553 51 aa2.17□□□□□ -2.06
NANOG-201ENST00000229307 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
NANOG-201ENST00000229307 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
NANOG-201ENST00000229307 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
NANOG-201ENST00000229307 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
NANOG-201ENST00000229307 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
NANOG-201ENST00000229307 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
NANOG-201ENST00000229307 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
NANOG-201ENST00000229307 LCE1EQ5T753 118 aa2□□□□□ -2.09
NANOG-201ENST00000229307 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
NANOG-201ENST00000229307 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
NANOG-201ENST00000229307 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
NANOG-201ENST00000229307 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
NANOG-201ENST00000229307 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
NANOG-201ENST00000229307 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
NANOG-201ENST00000229307 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
NANOG-201ENST00000229307 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
NANOG-201ENST00000229307 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
NANOG-201ENST00000229307 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
NANOG-201ENST00000229307 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
NANOG-201ENST00000229307 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
NANOG-201ENST00000229307 KRTAP4-12Q9BQ66 201 aa1.75□□□□□ -2.13
NANOG-201ENST00000229307 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
NANOG-201ENST00000229307 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
NANOG-201ENST00000229307 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
NANOG-201ENST00000229307 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
NANOG-201ENST00000229307 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
NANOG-201ENST00000229307 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
NANOG-201ENST00000229307 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
NANOG-201ENST00000229307 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
NANOG-201ENST00000229307 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
NANOG-201ENST00000229307 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.21
NANOG-201ENST00000229307 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
NANOG-201ENST00000229307 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 39.9 ms