RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
PRDM4-201ENST00000228437 MT1LQ93083 61 aa4.79□□□□□ -1.64
PRDM4-201ENST00000228437 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
PRDM4-201ENST00000228437 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
PRDM4-201ENST00000228437 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
PRDM4-201ENST00000228437 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
PRDM4-201ENST00000228437 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
PRDM4-201ENST00000228437 MT1EP04732 61 aa4.71□□□□□ -1.65
PRDM4-201ENST00000228437 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
PRDM4-201ENST00000228437 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
PRDM4-201ENST00000228437 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
PRDM4-201ENST00000228437 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
PRDM4-201ENST00000228437 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
PRDM4-201ENST00000228437 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
PRDM4-201ENST00000228437 MT1MQ8N339 61 aa4.45□□□□□ -1.7
PRDM4-201ENST00000228437 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
PRDM4-201ENST00000228437 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
PRDM4-201ENST00000228437 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
PRDM4-201ENST00000228437 PRM1P04553 51 aa4.41□□□□□ -1.7
PRDM4-201ENST00000228437 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
PRDM4-201ENST00000228437 SPRR2EP22531 72 aa4.36□□□□□ -1.71
PRDM4-201ENST00000228437 SPRR2BP35325 72 aa4.36□□□□□ -1.71
PRDM4-201ENST00000228437 SPRR2AP35326 72 aa4.36□□□□□ -1.71
PRDM4-201ENST00000228437 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
PRDM4-201ENST00000228437 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
PRDM4-201ENST00000228437 LCE2DQ5TA82 110 aaPredicted RBP4.28□□□□□ -1.72
PRDM4-201ENST00000228437 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
PRDM4-201ENST00000228437 SPRR2DP22532 72 aa4.17□□□□□ -1.74
PRDM4-201ENST00000228437 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
PRDM4-201ENST00000228437 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
PRDM4-201ENST00000228437 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
PRDM4-201ENST00000228437 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
PRDM4-201ENST00000228437 MT1AP04731 61 aa3.99□□□□□ -1.77
PRDM4-201ENST00000228437 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
PRDM4-201ENST00000228437 MT4P47944 62 aa3.89□□□□□ -1.79
PRDM4-201ENST00000228437 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
PRDM4-201ENST00000228437 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
PRDM4-201ENST00000228437 MT3P25713 68 aa3.78□□□□□ -1.8
PRDM4-201ENST00000228437 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
PRDM4-201ENST00000228437 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
PRDM4-201ENST00000228437 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
PRDM4-201ENST00000228437 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
PRDM4-201ENST00000228437 NEBP20929 6669 aa3.62□□□□□ -1.83
PRDM4-201ENST00000228437 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
PRDM4-201ENST00000228437 KRTAP5-9P26371 169 aa3.59□□□□□ -1.84
PRDM4-201ENST00000228437 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
PRDM4-201ENST00000228437 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
PRDM4-201ENST00000228437 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
PRDM4-201ENST00000228437 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
PRDM4-201ENST00000228437 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PRDM4-201ENST00000228437 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
PRDM4-201ENST00000228437 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
PRDM4-201ENST00000228437 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
PRDM4-201ENST00000228437 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
PRDM4-201ENST00000228437 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
PRDM4-201ENST00000228437 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
PRDM4-201ENST00000228437 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
PRDM4-201ENST00000228437 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
PRDM4-201ENST00000228437 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
PRDM4-201ENST00000228437 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
PRDM4-201ENST00000228437 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
PRDM4-201ENST00000228437 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
PRDM4-201ENST00000228437 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PRDM4-201ENST00000228437 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
PRDM4-201ENST00000228437 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PRDM4-201ENST00000228437 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
PRDM4-201ENST00000228437 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PRDM4-201ENST00000228437 KRTAP5-8O75690 187 aa2.54□□□□□ -2
PRDM4-201ENST00000228437 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
PRDM4-201ENST00000228437 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
PRDM4-201ENST00000228437 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
PRDM4-201ENST00000228437 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PRDM4-201ENST00000228437 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
PRDM4-201ENST00000228437 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PRDM4-201ENST00000228437 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PRDM4-201ENST00000228437 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
PRDM4-201ENST00000228437 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 64.1 ms