RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
UBE2D4-201ENST00000222402 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
UBE2D4-201ENST00000222402 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
UBE2D4-201ENST00000222402 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
UBE2D4-201ENST00000222402 MT1MQ8N339 61 aa4.83□□□□□ -1.64
UBE2D4-201ENST00000222402 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
UBE2D4-201ENST00000222402 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
UBE2D4-201ENST00000222402 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
UBE2D4-201ENST00000222402 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
UBE2D4-201ENST00000222402 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
UBE2D4-201ENST00000222402 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
UBE2D4-201ENST00000222402 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
UBE2D4-201ENST00000222402 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
UBE2D4-201ENST00000222402 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
UBE2D4-201ENST00000222402 SPRR2EP22531 72 aa4.56□□□□□ -1.68
UBE2D4-201ENST00000222402 SPRR2BP35325 72 aa4.56□□□□□ -1.68
UBE2D4-201ENST00000222402 SPRR2AP35326 72 aa4.56□□□□□ -1.68
UBE2D4-201ENST00000222402 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
UBE2D4-201ENST00000222402 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
UBE2D4-201ENST00000222402 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
UBE2D4-201ENST00000222402 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
UBE2D4-201ENST00000222402 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
UBE2D4-201ENST00000222402 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
UBE2D4-201ENST00000222402 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
UBE2D4-201ENST00000222402 SPRR2DP22532 72 aa4.37□□□□□ -1.71
UBE2D4-201ENST00000222402 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
UBE2D4-201ENST00000222402 MT1AP04731 61 aa4.34□□□□□ -1.71
UBE2D4-201ENST00000222402 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
UBE2D4-201ENST00000222402 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
UBE2D4-201ENST00000222402 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
UBE2D4-201ENST00000222402 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
UBE2D4-201ENST00000222402 PRM1P04553 51 aa4.11□□□□□ -1.75
UBE2D4-201ENST00000222402 MT3P25713 68 aa4.08□□□□□ -1.76
UBE2D4-201ENST00000222402 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
UBE2D4-201ENST00000222402 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
UBE2D4-201ENST00000222402 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
UBE2D4-201ENST00000222402 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
UBE2D4-201ENST00000222402 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
UBE2D4-201ENST00000222402 MT4P47944 62 aa3.93□□□□□ -1.78
UBE2D4-201ENST00000222402 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
UBE2D4-201ENST00000222402 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
UBE2D4-201ENST00000222402 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
UBE2D4-201ENST00000222402 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
UBE2D4-201ENST00000222402 NEBP20929 6669 aa3.59□□□□□ -1.83
UBE2D4-201ENST00000222402 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
UBE2D4-201ENST00000222402 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
UBE2D4-201ENST00000222402 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
UBE2D4-201ENST00000222402 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
UBE2D4-201ENST00000222402 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
UBE2D4-201ENST00000222402 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
UBE2D4-201ENST00000222402 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
UBE2D4-201ENST00000222402 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.89
UBE2D4-201ENST00000222402 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
UBE2D4-201ENST00000222402 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
UBE2D4-201ENST00000222402 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
UBE2D4-201ENST00000222402 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
UBE2D4-201ENST00000222402 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
UBE2D4-201ENST00000222402 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
UBE2D4-201ENST00000222402 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
UBE2D4-201ENST00000222402 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
UBE2D4-201ENST00000222402 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
UBE2D4-201ENST00000222402 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
UBE2D4-201ENST00000222402 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
UBE2D4-201ENST00000222402 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
UBE2D4-201ENST00000222402 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
UBE2D4-201ENST00000222402 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
UBE2D4-201ENST00000222402 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
UBE2D4-201ENST00000222402 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
UBE2D4-201ENST00000222402 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
UBE2D4-201ENST00000222402 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
UBE2D4-201ENST00000222402 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
UBE2D4-201ENST00000222402 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
UBE2D4-201ENST00000222402 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
UBE2D4-201ENST00000222402 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
UBE2D4-201ENST00000222402 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
UBE2D4-201ENST00000222402 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
UBE2D4-201ENST00000222402 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 75.6 ms