RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
CSTF1-201ENST00000217109 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
CSTF1-201ENST00000217109 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CSTF1-201ENST00000217109 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
CSTF1-201ENST00000217109 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
CSTF1-201ENST00000217109 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
CSTF1-201ENST00000217109 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
CSTF1-201ENST00000217109 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
CSTF1-201ENST00000217109 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
CSTF1-201ENST00000217109 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
CSTF1-201ENST00000217109 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
CSTF1-201ENST00000217109 MT1MQ8N339 61 aa3.13□□□□□ -1.91
CSTF1-201ENST00000217109 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
CSTF1-201ENST00000217109 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
CSTF1-201ENST00000217109 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
CSTF1-201ENST00000217109 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
CSTF1-201ENST00000217109 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
CSTF1-201ENST00000217109 SPRR2EP22531 72 aa3.03□□□□□ -1.92
CSTF1-201ENST00000217109 SPRR2BP35325 72 aa3.03□□□□□ -1.92
CSTF1-201ENST00000217109 SPRR2AP35326 72 aa3.03□□□□□ -1.92
CSTF1-201ENST00000217109 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
CSTF1-201ENST00000217109 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
CSTF1-201ENST00000217109 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
CSTF1-201ENST00000217109 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
CSTF1-201ENST00000217109 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
CSTF1-201ENST00000217109 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CSTF1-201ENST00000217109 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
CSTF1-201ENST00000217109 SPRR2DP22532 72 aa2.89□□□□□ -1.95
CSTF1-201ENST00000217109 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CSTF1-201ENST00000217109 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
CSTF1-201ENST00000217109 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
CSTF1-201ENST00000217109 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
CSTF1-201ENST00000217109 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
CSTF1-201ENST00000217109 MT1AP04731 61 aa2.81□□□□□ -1.96
CSTF1-201ENST00000217109 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
CSTF1-201ENST00000217109 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
CSTF1-201ENST00000217109 PRM1P04553 51 aa2.74□□□□□ -1.97
CSTF1-201ENST00000217109 MT3P25713 68 aa2.68□□□□□ -1.98
CSTF1-201ENST00000217109 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
CSTF1-201ENST00000217109 KRTAP9-7A8MTY7 169 aa2.65□□□□□ -1.98
CSTF1-201ENST00000217109 MT4P47944 62 aa2.65□□□□□ -1.99
CSTF1-201ENST00000217109 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CSTF1-201ENST00000217109 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
CSTF1-201ENST00000217109 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
CSTF1-201ENST00000217109 LCE1DQ5T752 114 aa2.46□□□□□ -2.02
CSTF1-201ENST00000217109 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
CSTF1-201ENST00000217109 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
CSTF1-201ENST00000217109 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
CSTF1-201ENST00000217109 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
CSTF1-201ENST00000217109 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
CSTF1-201ENST00000217109 NEBP20929 6669 aa2.29□□□□□ -2.04
CSTF1-201ENST00000217109 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.05
CSTF1-201ENST00000217109 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
CSTF1-201ENST00000217109 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
CSTF1-201ENST00000217109 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
CSTF1-201ENST00000217109 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CSTF1-201ENST00000217109 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
CSTF1-201ENST00000217109 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
CSTF1-201ENST00000217109 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
CSTF1-201ENST00000217109 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
CSTF1-201ENST00000217109 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CSTF1-201ENST00000217109 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
CSTF1-201ENST00000217109 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CSTF1-201ENST00000217109 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
CSTF1-201ENST00000217109 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
CSTF1-201ENST00000217109 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
CSTF1-201ENST00000217109 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
CSTF1-201ENST00000217109 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CSTF1-201ENST00000217109 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
CSTF1-201ENST00000217109 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
CSTF1-201ENST00000217109 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
CSTF1-201ENST00000217109 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
CSTF1-201ENST00000217109 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
CSTF1-201ENST00000217109 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CSTF1-201ENST00000217109 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
CSTF1-201ENST00000217109 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CSTF1-201ENST00000217109 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms