RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
SPTLC2-201ENST00000216484 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
SPTLC2-201ENST00000216484 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
SPTLC2-201ENST00000216484 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
SPTLC2-201ENST00000216484 LRP2P98164 4655 aa3.97□□□□□ -1.77
SPTLC2-201ENST00000216484 RYR1P21817 5038 aa3.95□□□□□ -1.78
SPTLC2-201ENST00000216484 MT1AP04731 61 aa3.95□□□□□ -1.78
SPTLC2-201ENST00000216484 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
SPTLC2-201ENST00000216484 DNHD1Q96M86 4753 aa3.88□□□□□ -1.79
SPTLC2-201ENST00000216484 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
SPTLC2-201ENST00000216484 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
SPTLC2-201ENST00000216484 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SPTLC2-201ENST00000216484 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SPTLC2-201ENST00000216484 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
SPTLC2-201ENST00000216484 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
SPTLC2-201ENST00000216484 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
SPTLC2-201ENST00000216484 RYR3Q15413 4870 aa3.63□□□□□ -1.83
SPTLC2-201ENST00000216484 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
SPTLC2-201ENST00000216484 LCE2AQ5TA79 106 aaPredicted RBP3.59□□□□□ -1.83
SPTLC2-201ENST00000216484 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
SPTLC2-201ENST00000216484 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
SPTLC2-201ENST00000216484 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SPTLC2-201ENST00000216484 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
SPTLC2-201ENST00000216484 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
SPTLC2-201ENST00000216484 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
SPTLC2-201ENST00000216484 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
SPTLC2-201ENST00000216484 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SPTLC2-201ENST00000216484 HERC2O95714 4834 aa3.35□□□□□ -1.87
SPTLC2-201ENST00000216484 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
SPTLC2-201ENST00000216484 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
SPTLC2-201ENST00000216484 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
SPTLC2-201ENST00000216484 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SPTLC2-201ENST00000216484 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SPTLC2-201ENST00000216484 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
SPTLC2-201ENST00000216484 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
SPTLC2-201ENST00000216484 RYR2Q92736 4967 aa3.13□□□□□ -1.91
SPTLC2-201ENST00000216484 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
SPTLC2-201ENST00000216484 PCLOQ9Y6V0 5065 aa3.06□□□□□ -1.92
SPTLC2-201ENST00000216484 HERC1Q15751 4861 aa3.05□□□□□ -1.92
SPTLC2-201ENST00000216484 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
SPTLC2-201ENST00000216484 MUC2Q02817 5179 aa2.95□□□□□ -1.94
SPTLC2-201ENST00000216484 KMT2DO14686 5537 aa2.91□□□□□ -1.94
SPTLC2-201ENST00000216484 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
SPTLC2-201ENST00000216484 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
SPTLC2-201ENST00000216484 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
SPTLC2-201ENST00000216484 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
SPTLC2-201ENST00000216484 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
SPTLC2-201ENST00000216484 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
SPTLC2-201ENST00000216484 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
SPTLC2-201ENST00000216484 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SPTLC2-201ENST00000216484 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
SPTLC2-201ENST00000216484 KRTAP5-9P26371 169 aa2.57□□□□□ -2
SPTLC2-201ENST00000216484 ABCA13Q86UQ4 5058 aa2.56□□□□□ -2
SPTLC2-201ENST00000216484 NEBP20929 6669 aa2.47□□□□□ -2.01
SPTLC2-201ENST00000216484 RNF213Q63HN8 5207 aa2.46□□□□□ -2.02
SPTLC2-201ENST00000216484 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SPTLC2-201ENST00000216484 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
SPTLC2-201ENST00000216484 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SPTLC2-201ENST00000216484 USH2AO75445 5202 aa2.24□□□□□ -2.05
SPTLC2-201ENST00000216484 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
SPTLC2-201ENST00000216484 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SPTLC2-201ENST00000216484 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
SPTLC2-201ENST00000216484 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
SPTLC2-201ENST00000216484 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
SPTLC2-201ENST00000216484 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SPTLC2-201ENST00000216484 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
SPTLC2-201ENST00000216484 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
SPTLC2-201ENST00000216484 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
SPTLC2-201ENST00000216484 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
SPTLC2-201ENST00000216484 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SPTLC2-201ENST00000216484 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SPTLC2-201ENST00000216484 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
SPTLC2-201ENST00000216484 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
SPTLC2-201ENST00000216484 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
SPTLC2-201ENST00000216484 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
SPTLC2-201ENST00000216484 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SPTLC2-201ENST00000216484 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 225 ms