RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.95
SUPT16H-201ENST00000216297 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SUPT16H-201ENST00000216297 MT1GP13640 62 aa2.84□□□□□ -1.95
SUPT16H-201ENST00000216297 USH2AO75445 5202 aa2.83□□□□□ -1.96
SUPT16H-201ENST00000216297 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
SUPT16H-201ENST00000216297 MT1LQ93083 61 aa2.82□□□□□ -1.96
SUPT16H-201ENST00000216297 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
SUPT16H-201ENST00000216297 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
SUPT16H-201ENST00000216297 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
SUPT16H-201ENST00000216297 MT1EP04732 61 aa2.75□□□□□ -1.97
SUPT16H-201ENST00000216297 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
SUPT16H-201ENST00000216297 PRM1P04553 51 aa2.71□□□□□ -1.98
SUPT16H-201ENST00000216297 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
SUPT16H-201ENST00000216297 MT3P25713 68 aa2.66□□□□□ -1.98
SUPT16H-201ENST00000216297 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
SUPT16H-201ENST00000216297 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
SUPT16H-201ENST00000216297 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
SUPT16H-201ENST00000216297 KRTAP9-2Q9BYQ4 174 aa2.59□□□□□ -2
SUPT16H-201ENST00000216297 MT1MQ8N339 61 aa2.58□□□□□ -2
SUPT16H-201ENST00000216297 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
SUPT16H-201ENST00000216297 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
SUPT16H-201ENST00000216297 SPRR2FQ96RM1 72 aa2.53□□□□□ -2.01
SUPT16H-201ENST00000216297 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
SUPT16H-201ENST00000216297 MT1AP04731 61 aa2.47□□□□□ -2.01
SUPT16H-201ENST00000216297 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP9-6A0A140TA67 174 aa2.45□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
SUPT16H-201ENST00000216297 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
SUPT16H-201ENST00000216297 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
SUPT16H-201ENST00000216297 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
SUPT16H-201ENST00000216297 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SUPT16H-201ENST00000216297 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
SUPT16H-201ENST00000216297 KRTAP9-4Q9BYQ2 154 aa2.32□□□□□ -2.04
SUPT16H-201ENST00000216297 LCE5AQ5TCM9 118 aa2.31□□□□□ -2.04
SUPT16H-201ENST00000216297 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
SUPT16H-201ENST00000216297 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
SUPT16H-201ENST00000216297 SPRR2EP22531 72 aa2.15□□□□□ -2.06
SUPT16H-201ENST00000216297 SPRR2BP35325 72 aa2.15□□□□□ -2.06
SUPT16H-201ENST00000216297 SPRR2AP35326 72 aa2.15□□□□□ -2.06
SUPT16H-201ENST00000216297 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
SUPT16H-201ENST00000216297 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
SUPT16H-201ENST00000216297 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SUPT16H-201ENST00000216297 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.11□□□□□ -2.07
SUPT16H-201ENST00000216297 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SUPT16H-201ENST00000216297 SPRR2DP22532 72 aa2.07□□□□□ -2.08
SUPT16H-201ENST00000216297 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
SUPT16H-201ENST00000216297 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
SUPT16H-201ENST00000216297 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
SUPT16H-201ENST00000216297 MT4P47944 62 aa2.01□□□□□ -2.09
SUPT16H-201ENST00000216297 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
SUPT16H-201ENST00000216297 NEBP20929 6669 aa1.92□□□□□ -2.1
SUPT16H-201ENST00000216297 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
SUPT16H-201ENST00000216297 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SUPT16H-201ENST00000216297 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
SUPT16H-201ENST00000216297 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
SUPT16H-201ENST00000216297 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
SUPT16H-201ENST00000216297 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SUPT16H-201ENST00000216297 KRTAP4-2Q9BYR5 136 aa1.7□□□□□ -2.14
SUPT16H-201ENST00000216297 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
SUPT16H-201ENST00000216297 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
SUPT16H-201ENST00000216297 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
SUPT16H-201ENST00000216297 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
SUPT16H-201ENST00000216297 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SUPT16H-201ENST00000216297 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
SUPT16H-201ENST00000216297 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
SUPT16H-201ENST00000216297 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SUPT16H-201ENST00000216297 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
SUPT16H-201ENST00000216297 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
SUPT16H-201ENST00000216297 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
SUPT16H-201ENST00000216297 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
SUPT16H-201ENST00000216297 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SUPT16H-201ENST00000216297 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
SUPT16H-201ENST00000216297 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
SUPT16H-201ENST00000216297 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 31.2 ms