RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MUC17Q685J3 4493 aa4.21□□□□□ -1.74
TGFBR3-201ENST00000212355 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
TGFBR3-201ENST00000212355 MT1MQ8N339 61 aa4.19□□□□□ -1.74
TGFBR3-201ENST00000212355 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
TGFBR3-201ENST00000212355 HERC1Q15751 4861 aa4.18□□□□□ -1.74
TGFBR3-201ENST00000212355 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
TGFBR3-201ENST00000212355 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
TGFBR3-201ENST00000212355 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
TGFBR3-201ENST00000212355 MT3P25713 68 aa4.02□□□□□ -1.77
TGFBR3-201ENST00000212355 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
TGFBR3-201ENST00000212355 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
TGFBR3-201ENST00000212355 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
TGFBR3-201ENST00000212355 MUC2Q02817 5179 aa3.89□□□□□ -1.79
TGFBR3-201ENST00000212355 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
TGFBR3-201ENST00000212355 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
TGFBR3-201ENST00000212355 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
TGFBR3-201ENST00000212355 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
TGFBR3-201ENST00000212355 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
TGFBR3-201ENST00000212355 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
TGFBR3-201ENST00000212355 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
TGFBR3-201ENST00000212355 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
TGFBR3-201ENST00000212355 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
TGFBR3-201ENST00000212355 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
TGFBR3-201ENST00000212355 MT1AP04731 61 aa3.77□□□□□ -1.81
TGFBR3-201ENST00000212355 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TGFBR3-201ENST00000212355 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
TGFBR3-201ENST00000212355 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
TGFBR3-201ENST00000212355 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
TGFBR3-201ENST00000212355 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
TGFBR3-201ENST00000212355 KMT2DO14686 5537 aa3.66□□□□□ -1.82
TGFBR3-201ENST00000212355 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TGFBR3-201ENST00000212355 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
TGFBR3-201ENST00000212355 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TGFBR3-201ENST00000212355 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
TGFBR3-201ENST00000212355 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
TGFBR3-201ENST00000212355 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
TGFBR3-201ENST00000212355 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
TGFBR3-201ENST00000212355 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
TGFBR3-201ENST00000212355 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
TGFBR3-201ENST00000212355 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
TGFBR3-201ENST00000212355 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
TGFBR3-201ENST00000212355 USH2AO75445 5202 aa3.3□□□□□ -1.88
TGFBR3-201ENST00000212355 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
TGFBR3-201ENST00000212355 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
TGFBR3-201ENST00000212355 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
TGFBR3-201ENST00000212355 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
TGFBR3-201ENST00000212355 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
TGFBR3-201ENST00000212355 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TGFBR3-201ENST00000212355 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
TGFBR3-201ENST00000212355 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
TGFBR3-201ENST00000212355 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
TGFBR3-201ENST00000212355 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
TGFBR3-201ENST00000212355 NEBP20929 6669 aa3.03□□□□□ -1.93
TGFBR3-201ENST00000212355 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
TGFBR3-201ENST00000212355 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
TGFBR3-201ENST00000212355 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
TGFBR3-201ENST00000212355 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
TGFBR3-201ENST00000212355 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
TGFBR3-201ENST00000212355 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
TGFBR3-201ENST00000212355 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
TGFBR3-201ENST00000212355 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
TGFBR3-201ENST00000212355 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.04
TGFBR3-201ENST00000212355 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
TGFBR3-201ENST00000212355 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
TGFBR3-201ENST00000212355 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
TGFBR3-201ENST00000212355 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
TGFBR3-201ENST00000212355 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
TGFBR3-201ENST00000212355 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
TGFBR3-201ENST00000212355 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
TGFBR3-201ENST00000212355 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
TGFBR3-201ENST00000212355 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
TGFBR3-201ENST00000212355 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
TGFBR3-201ENST00000212355 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
TGFBR3-201ENST00000212355 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
TGFBR3-201ENST00000212355 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
TGFBR3-201ENST00000212355 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
TGFBR3-201ENST00000212355 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 109 ms