RNA–Protein interactions for RNA: ENST00000182527.3

TRAM2-201, Transcript of translocation associated membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM2, Length 6,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-201ENST00000182527 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
TRAM2-201ENST00000182527 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
TRAM2-201ENST00000182527 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
TRAM2-201ENST00000182527 EPPK1P58107 5090 aaKnown RBP2.6□□□□□ -1.99
TRAM2-201ENST00000182527 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
TRAM2-201ENST00000182527 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
TRAM2-201ENST00000182527 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
TRAM2-201ENST00000182527 MT1BP07438 61 aa2.57□□□□□ -2
TRAM2-201ENST00000182527 MUC2Q02817 5179 aa2.54□□□□□ -2
TRAM2-201ENST00000182527 LCE1CQ5T751 118 aa2.54□□□□□ -2
TRAM2-201ENST00000182527 LCE1EQ5T753 118 aa2.54□□□□□ -2
TRAM2-201ENST00000182527 LCE1FQ5T754 118 aa2.54□□□□□ -2
TRAM2-201ENST00000182527 TNXBP22105 4242 aa2.54□□□□□ -2
TRAM2-201ENST00000182527 MT3P25713 68 aa2.53□□□□□ -2
TRAM2-201ENST00000182527 MT1XP80297 61 aa2.51□□□□□ -2.01
TRAM2-201ENST00000182527 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
TRAM2-201ENST00000182527 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
TRAM2-201ENST00000182527 KRTAP19-2Q3LHN2 52 aa2.5□□□□□ -2.01
TRAM2-201ENST00000182527 LPAP08519 4548 aa2.49□□□□□ -2.01
TRAM2-201ENST00000182527 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
TRAM2-201ENST00000182527 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
TRAM2-201ENST00000182527 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
TRAM2-201ENST00000182527 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
TRAM2-201ENST00000182527 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
TRAM2-201ENST00000182527 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
TRAM2-201ENST00000182527 NEBP20929 6669 aa2.42□□□□□ -2.02
TRAM2-201ENST00000182527 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.03
TRAM2-201ENST00000182527 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
TRAM2-201ENST00000182527 MT1MQ8N339 61 aa2.38□□□□□ -2.03
TRAM2-201ENST00000182527 MT1EP04732 61 aa2.37□□□□□ -2.03
TRAM2-201ENST00000182527 MT1LQ93083 61 aa2.32□□□□□ -2.04
TRAM2-201ENST00000182527 FSIP2Q5CZC0 6907 aa2.31□□□□□ -2.04
TRAM2-201ENST00000182527 USH2AO75445 5202 aa2.3□□□□□ -2.04
TRAM2-201ENST00000182527 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
TRAM2-201ENST00000182527 PRM1P04553 51 aa2.23□□□□□ -2.05
TRAM2-201ENST00000182527 MT1AP04731 61 aa2.2□□□□□ -2.06
TRAM2-201ENST00000182527 KRTAP5-9P26371 169 aa2.15□□□□□ -2.06
TRAM2-201ENST00000182527 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
TRAM2-201ENST00000182527 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
TRAM2-201ENST00000182527 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
TRAM2-201ENST00000182527 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
TRAM2-201ENST00000182527 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
TRAM2-201ENST00000182527 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
TRAM2-201ENST00000182527 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
TRAM2-201ENST00000182527 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
TRAM2-201ENST00000182527 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.1
TRAM2-201ENST00000182527 KMT2DO14686 5537 aa1.96□□□□□ -2.1
TRAM2-201ENST00000182527 KRTAP4-6Q9BYQ5 205 aa1.94□□□□□ -2.1
TRAM2-201ENST00000182527 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
TRAM2-201ENST00000182527 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
TRAM2-201ENST00000182527 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
TRAM2-201ENST00000182527 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
TRAM2-201ENST00000182527 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
TRAM2-201ENST00000182527 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
TRAM2-201ENST00000182527 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
TRAM2-201ENST00000182527 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
TRAM2-201ENST00000182527 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
TRAM2-201ENST00000182527 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
TRAM2-201ENST00000182527 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
TRAM2-201ENST00000182527 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
TRAM2-201ENST00000182527 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TRAM2-201ENST00000182527 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
TRAM2-201ENST00000182527 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
TRAM2-201ENST00000182527 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
TRAM2-201ENST00000182527 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
TRAM2-201ENST00000182527 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
TRAM2-201ENST00000182527 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
TRAM2-201ENST00000182527 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
TRAM2-201ENST00000182527 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
TRAM2-201ENST00000182527 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
TRAM2-201ENST00000182527 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
TRAM2-201ENST00000182527 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
TRAM2-201ENST00000182527 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
TRAM2-201ENST00000182527 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
TRAM2-201ENST00000182527 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
TRAM2-201ENST00000182527 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
TRAM2-201ENST00000182527 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms