RNA–Protein interactions for RNA: ENST00000160373.7

CTTNBP2-201, Transcript of cortactin binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2, Length 5,970 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-201ENST00000160373 MT1LQ93083 61 aa3.83□□□□□ -1.8
CTTNBP2-201ENST00000160373 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
CTTNBP2-201ENST00000160373 MT1EP04732 61 aa3.82□□□□□ -1.8
CTTNBP2-201ENST00000160373 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
CTTNBP2-201ENST00000160373 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CTTNBP2-201ENST00000160373 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
CTTNBP2-201ENST00000160373 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
CTTNBP2-201ENST00000160373 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
CTTNBP2-201ENST00000160373 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
CTTNBP2-201ENST00000160373 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
CTTNBP2-201ENST00000160373 MT1MQ8N339 61 aa3.73□□□□□ -1.81
CTTNBP2-201ENST00000160373 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
CTTNBP2-201ENST00000160373 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CTTNBP2-201ENST00000160373 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CTTNBP2-201ENST00000160373 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CTTNBP2-201ENST00000160373 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
CTTNBP2-201ENST00000160373 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
CTTNBP2-201ENST00000160373 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CTTNBP2-201ENST00000160373 MT3P25713 68 aa3.57□□□□□ -1.84
CTTNBP2-201ENST00000160373 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CTTNBP2-201ENST00000160373 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
CTTNBP2-201ENST00000160373 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
CTTNBP2-201ENST00000160373 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
CTTNBP2-201ENST00000160373 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
CTTNBP2-201ENST00000160373 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
CTTNBP2-201ENST00000160373 USH2AO75445 5202 aa3.43□□□□□ -1.86
CTTNBP2-201ENST00000160373 PRM1P04553 51 aa3.42□□□□□ -1.86
CTTNBP2-201ENST00000160373 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
CTTNBP2-201ENST00000160373 KMT2DO14686 5537 aa3.39□□□□□ -1.87
CTTNBP2-201ENST00000160373 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
CTTNBP2-201ENST00000160373 MT1AP04731 61 aa3.36□□□□□ -1.87
CTTNBP2-201ENST00000160373 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
CTTNBP2-201ENST00000160373 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
CTTNBP2-201ENST00000160373 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
CTTNBP2-201ENST00000160373 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
CTTNBP2-201ENST00000160373 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
CTTNBP2-201ENST00000160373 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CTTNBP2-201ENST00000160373 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
CTTNBP2-201ENST00000160373 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
CTTNBP2-201ENST00000160373 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
CTTNBP2-201ENST00000160373 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
CTTNBP2-201ENST00000160373 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
CTTNBP2-201ENST00000160373 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CTTNBP2-201ENST00000160373 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
CTTNBP2-201ENST00000160373 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CTTNBP2-201ENST00000160373 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
CTTNBP2-201ENST00000160373 NEBP20929 6669 aa3.06□□□□□ -1.92
CTTNBP2-201ENST00000160373 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CTTNBP2-201ENST00000160373 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
CTTNBP2-201ENST00000160373 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
CTTNBP2-201ENST00000160373 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CTTNBP2-201ENST00000160373 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
CTTNBP2-201ENST00000160373 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
CTTNBP2-201ENST00000160373 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
CTTNBP2-201ENST00000160373 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
CTTNBP2-201ENST00000160373 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
CTTNBP2-201ENST00000160373 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CTTNBP2-201ENST00000160373 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
CTTNBP2-201ENST00000160373 MUC5ACP98088 5654 aa2.53□□□□□ -2
CTTNBP2-201ENST00000160373 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
CTTNBP2-201ENST00000160373 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
CTTNBP2-201ENST00000160373 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
CTTNBP2-201ENST00000160373 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
CTTNBP2-201ENST00000160373 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
CTTNBP2-201ENST00000160373 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
CTTNBP2-201ENST00000160373 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
CTTNBP2-201ENST00000160373 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CTTNBP2-201ENST00000160373 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
CTTNBP2-201ENST00000160373 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
CTTNBP2-201ENST00000160373 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
CTTNBP2-201ENST00000160373 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CTTNBP2-201ENST00000160373 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CTTNBP2-201ENST00000160373 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
CTTNBP2-201ENST00000160373 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
CTTNBP2-201ENST00000160373 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
CTTNBP2-201ENST00000160373 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CTTNBP2-201ENST00000160373 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 42.9 ms