RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
PKP2-201ENST00000070846 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
PKP2-201ENST00000070846 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
PKP2-201ENST00000070846 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
PKP2-201ENST00000070846 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
PKP2-201ENST00000070846 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
PKP2-201ENST00000070846 MT1EP04732 61 aa3.81□□□□□ -1.8
PKP2-201ENST00000070846 MT1LQ93083 61 aa3.8□□□□□ -1.8
PKP2-201ENST00000070846 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
PKP2-201ENST00000070846 USH2AO75445 5202 aa3.7□□□□□ -1.82
PKP2-201ENST00000070846 MT4P47944 62 aa3.7□□□□□ -1.82
PKP2-201ENST00000070846 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
PKP2-201ENST00000070846 MT1MQ8N339 61 aa3.69□□□□□ -1.82
PKP2-201ENST00000070846 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
PKP2-201ENST00000070846 KMT2DO14686 5537 aa3.67□□□□□ -1.82
PKP2-201ENST00000070846 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
PKP2-201ENST00000070846 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
PKP2-201ENST00000070846 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
PKP2-201ENST00000070846 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
PKP2-201ENST00000070846 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
PKP2-201ENST00000070846 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
PKP2-201ENST00000070846 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
PKP2-201ENST00000070846 MT3P25713 68 aa3.52□□□□□ -1.85
PKP2-201ENST00000070846 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
PKP2-201ENST00000070846 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
PKP2-201ENST00000070846 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
PKP2-201ENST00000070846 LCE1DQ5T752 114 aa3.4□□□□□ -1.86
PKP2-201ENST00000070846 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PKP2-201ENST00000070846 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
PKP2-201ENST00000070846 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
PKP2-201ENST00000070846 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
PKP2-201ENST00000070846 MT1AP04731 61 aa3.36□□□□□ -1.87
PKP2-201ENST00000070846 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
PKP2-201ENST00000070846 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
PKP2-201ENST00000070846 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
PKP2-201ENST00000070846 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
PKP2-201ENST00000070846 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
PKP2-201ENST00000070846 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
PKP2-201ENST00000070846 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
PKP2-201ENST00000070846 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PKP2-201ENST00000070846 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
PKP2-201ENST00000070846 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
PKP2-201ENST00000070846 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
PKP2-201ENST00000070846 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
PKP2-201ENST00000070846 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
PKP2-201ENST00000070846 NEBP20929 6669 aa3.17□□□□□ -1.9
PKP2-201ENST00000070846 PRM1P04553 51 aa3.13□□□□□ -1.91
PKP2-201ENST00000070846 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PKP2-201ENST00000070846 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PKP2-201ENST00000070846 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
PKP2-201ENST00000070846 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
PKP2-201ENST00000070846 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
PKP2-201ENST00000070846 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
PKP2-201ENST00000070846 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
PKP2-201ENST00000070846 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
PKP2-201ENST00000070846 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
PKP2-201ENST00000070846 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
PKP2-201ENST00000070846 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
PKP2-201ENST00000070846 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2.01
PKP2-201ENST00000070846 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
PKP2-201ENST00000070846 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
PKP2-201ENST00000070846 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
PKP2-201ENST00000070846 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
PKP2-201ENST00000070846 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
PKP2-201ENST00000070846 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
PKP2-201ENST00000070846 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
PKP2-201ENST00000070846 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PKP2-201ENST00000070846 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PKP2-201ENST00000070846 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
PKP2-201ENST00000070846 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
PKP2-201ENST00000070846 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
PKP2-201ENST00000070846 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
PKP2-201ENST00000070846 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
PKP2-201ENST00000070846 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
PKP2-201ENST00000070846 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
PKP2-201ENST00000070846 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
PKP2-201ENST00000070846 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 101.2 ms