RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
CDC27-201ENST00000066544 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
CDC27-201ENST00000066544 MT1GP13640 62 aa2.76□□□□□ -1.97
CDC27-201ENST00000066544 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
CDC27-201ENST00000066544 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
CDC27-201ENST00000066544 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
CDC27-201ENST00000066544 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
CDC27-201ENST00000066544 LCE2DQ5TA82 110 aaPredicted RBP2.72□□□□□ -1.97
CDC27-201ENST00000066544 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
CDC27-201ENST00000066544 MT1MQ8N339 61 aa2.67□□□□□ -1.98
CDC27-201ENST00000066544 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
CDC27-201ENST00000066544 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
CDC27-201ENST00000066544 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
CDC27-201ENST00000066544 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
CDC27-201ENST00000066544 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
CDC27-201ENST00000066544 MDN1Q9NU22 5596 aa2.59□□□□□ -2
CDC27-201ENST00000066544 LCE3BQ5TA77 95 aa2.58□□□□□ -2
CDC27-201ENST00000066544 KRTAP12-4P60329 112 aa2.55□□□□□ -2
CDC27-201ENST00000066544 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CDC27-201ENST00000066544 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
CDC27-201ENST00000066544 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
CDC27-201ENST00000066544 LCE1AQ5T7P2 110 aa2.4□□□□□ -2.03
CDC27-201ENST00000066544 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
CDC27-201ENST00000066544 SPRR2EP22531 72 aa2.39□□□□□ -2.03
CDC27-201ENST00000066544 SPRR2BP35325 72 aa2.39□□□□□ -2.03
CDC27-201ENST00000066544 SPRR2AP35326 72 aa2.39□□□□□ -2.03
CDC27-201ENST00000066544 MT1AP04731 61 aa2.37□□□□□ -2.03
CDC27-201ENST00000066544 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
CDC27-201ENST00000066544 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
CDC27-201ENST00000066544 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
CDC27-201ENST00000066544 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
CDC27-201ENST00000066544 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.05
CDC27-201ENST00000066544 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CDC27-201ENST00000066544 PRM1P04553 51 aa2.26□□□□□ -2.05
CDC27-201ENST00000066544 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CDC27-201ENST00000066544 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
CDC27-201ENST00000066544 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.06
CDC27-201ENST00000066544 MT3P25713 68 aa2.15□□□□□ -2.07
CDC27-201ENST00000066544 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
CDC27-201ENST00000066544 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
CDC27-201ENST00000066544 MT4P47944 62 aa2.09□□□□□ -2.08
CDC27-201ENST00000066544 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
CDC27-201ENST00000066544 NEBP20929 6669 aa2.01□□□□□ -2.09
CDC27-201ENST00000066544 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
CDC27-201ENST00000066544 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CDC27-201ENST00000066544 KRTAP2-2Q9BYT5 123 aa1.94□□□□□ -2.1
CDC27-201ENST00000066544 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
CDC27-201ENST00000066544 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
CDC27-201ENST00000066544 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
CDC27-201ENST00000066544 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
CDC27-201ENST00000066544 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
CDC27-201ENST00000066544 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
CDC27-201ENST00000066544 KRTAP5-3Q6L8H2 238 aa1.79□□□□□ -2.12
CDC27-201ENST00000066544 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.13
CDC27-201ENST00000066544 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
CDC27-201ENST00000066544 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CDC27-201ENST00000066544 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
CDC27-201ENST00000066544 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
CDC27-201ENST00000066544 KRTAP4-2Q9BYR5 136 aa1.66□□□□□ -2.14
CDC27-201ENST00000066544 KRTAP9-9Q9BYP9 154 aa1.65□□□□□ -2.15
CDC27-201ENST00000066544 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
CDC27-201ENST00000066544 LCE1CQ5T751 118 aa1.59□□□□□ -2.16
CDC27-201ENST00000066544 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
CDC27-201ENST00000066544 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
CDC27-201ENST00000066544 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
CDC27-201ENST00000066544 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CDC27-201ENST00000066544 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
CDC27-201ENST00000066544 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CDC27-201ENST00000066544 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
CDC27-201ENST00000066544 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
CDC27-201ENST00000066544 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
CDC27-201ENST00000066544 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
CDC27-201ENST00000066544 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CDC27-201ENST00000066544 LCE1FQ5T754 118 aa1.28□□□□□ -2.2
CDC27-201ENST00000066544 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CDC27-201ENST00000066544 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
CDC27-201ENST00000066544 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms