RNA–Protein interactions for RNA: ENST00000052569.10

GOPC-201, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOPC, Length 4,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-201ENST00000052569 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
GOPC-201ENST00000052569 MT1LQ93083 61 aa4.79□□□□□ -1.64
GOPC-201ENST00000052569 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
GOPC-201ENST00000052569 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
GOPC-201ENST00000052569 MT1EP04732 61 aa4.74□□□□□ -1.65
GOPC-201ENST00000052569 SPRR2DP22532 72 aa4.74□□□□□ -1.65
GOPC-201ENST00000052569 KMT2DO14686 5537 aa4.69□□□□□ -1.66
GOPC-201ENST00000052569 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
GOPC-201ENST00000052569 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
GOPC-201ENST00000052569 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
GOPC-201ENST00000052569 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
GOPC-201ENST00000052569 MT1MQ8N339 61 aa4.57□□□□□ -1.68
GOPC-201ENST00000052569 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
GOPC-201ENST00000052569 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
GOPC-201ENST00000052569 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
GOPC-201ENST00000052569 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
GOPC-201ENST00000052569 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
GOPC-201ENST00000052569 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
GOPC-201ENST00000052569 PRM1P04553 51 aa4.36□□□□□ -1.71
GOPC-201ENST00000052569 MT3P25713 68 aa4.35□□□□□ -1.71
GOPC-201ENST00000052569 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
GOPC-201ENST00000052569 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
GOPC-201ENST00000052569 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
GOPC-201ENST00000052569 MT4P47944 62 aa4.31□□□□□ -1.72
GOPC-201ENST00000052569 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
GOPC-201ENST00000052569 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
GOPC-201ENST00000052569 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
GOPC-201ENST00000052569 MT1AP04731 61 aa4.2□□□□□ -1.74
GOPC-201ENST00000052569 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
GOPC-201ENST00000052569 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
GOPC-201ENST00000052569 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
GOPC-201ENST00000052569 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
GOPC-201ENST00000052569 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
GOPC-201ENST00000052569 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
GOPC-201ENST00000052569 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
GOPC-201ENST00000052569 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
GOPC-201ENST00000052569 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
GOPC-201ENST00000052569 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
GOPC-201ENST00000052569 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
GOPC-201ENST00000052569 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
GOPC-201ENST00000052569 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
GOPC-201ENST00000052569 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
GOPC-201ENST00000052569 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
GOPC-201ENST00000052569 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
GOPC-201ENST00000052569 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
GOPC-201ENST00000052569 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
GOPC-201ENST00000052569 NEBP20929 6669 aa3.48□□□□□ -1.85
GOPC-201ENST00000052569 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
GOPC-201ENST00000052569 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
GOPC-201ENST00000052569 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
GOPC-201ENST00000052569 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
GOPC-201ENST00000052569 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
GOPC-201ENST00000052569 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
GOPC-201ENST00000052569 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
GOPC-201ENST00000052569 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
GOPC-201ENST00000052569 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
GOPC-201ENST00000052569 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
GOPC-201ENST00000052569 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.92
GOPC-201ENST00000052569 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
GOPC-201ENST00000052569 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
GOPC-201ENST00000052569 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
GOPC-201ENST00000052569 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
GOPC-201ENST00000052569 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
GOPC-201ENST00000052569 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
GOPC-201ENST00000052569 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
GOPC-201ENST00000052569 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
GOPC-201ENST00000052569 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
GOPC-201ENST00000052569 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
GOPC-201ENST00000052569 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
GOPC-201ENST00000052569 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
GOPC-201ENST00000052569 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
GOPC-201ENST00000052569 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
GOPC-201ENST00000052569 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
GOPC-201ENST00000052569 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
GOPC-201ENST00000052569 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
GOPC-201ENST00000052569 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
GOPC-201ENST00000052569 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms