RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 KprpB2RUR4 657 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm1553Q66VB7 94 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Colca2F8VPY8 239 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm12888Q3UW77 119 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Fmc1Q9CR13 113 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Zfp462B1AWL2 2495 aaKnown RBP9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Trav14-2A0A075B694 121 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Brd3osA0A1B0GRB6 84 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Dkk1O54908 272 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 P01783 136 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Defa16P50714 93 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm9961Q8BNV2 113 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ubald2Q8BQH4 164 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ly96Q9JHF9 160 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Myod1P10085 318 aa9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Rpl27aP14115 148 aaKnown RBP9.75□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Vsig4F6TUL9 280 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Psmg4P0C7N9 123 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Tcl1b4P56844 120 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Khdc1aQ3UWR2 166 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Znf146Q8BQN6 292 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 RtbdnQ8QZY4 247 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Lama1P19137 3084 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ighv8-12A0A0G2JDE1 119 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Rtl10D3YWW5 146 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Q9CQ90 155 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Plac1Q9JI83 173 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Dmxl1Q6PNC0 3013 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm10251J3QPM5 127 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gsx1P31315 261 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 4930596D02RikQ3V0H9 216 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Plxdc1Q91ZV7 500 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Tspan13Q9D8C2 204 aa9.74□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 BokO35425 213 aa9.73□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Hoxb4P10284 250 aa9.73□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 A230072I06RikQ3UUJ8 172 aa9.73□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Zg16Q8K0C5 167 aa9.73□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Plekhb2Q9QZC7 221 aa9.73□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm44965A0A0N4SVR3 59 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 D130052B06RikQ3UW13 202 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 AcanQ61282 2132 aaKnown RBP9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Fam110aQ8R184 296 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm20481G3UXK4 153 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ndufa1O35683 70 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 P18526 117 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 7420426K07RikQ3UX66 186 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Vmn1r62Q8R2C0 300 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Pip4p2Q9CZX7 257 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Rnf7Q9WTZ1 113 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm5093E9PZB3 174 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Olfr1243Q8VGM7 305 aa9.72□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Unc79Q0KK59 2596 aa9.71□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Foxi1Q922I5 372 aa9.71□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Wdr31Q9JHB4 367 aa9.71□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Srsf1Q6PDM2 248 aaKnown RBP9.71□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Immp1lQ9CQU8 166 aa9.71□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ccl8Q9Z121 97 aa9.71□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm5294J3QP53 216 aa9.7□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Khdc1cQ4KL78 166 aa9.7□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Mustn1Q99JI1 82 aa9.7□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Chac2Q9CQG1 178 aa9.7□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Myo15bI7HPW8 3033 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Trdv1A0A075B657 112 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P01739 132 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P01756 117 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P01757 117 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 CckP09240 115 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm17324Q8C6J8 137 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Tcrg-C3L7N479 172 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P03985 172 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ly6c1P0CW02 131 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Trav6d-4Q5R1I0 115 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Atp6v0e2Q91XE7 81 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Timm23Q9WTQ8 209 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Trbv31A0A075B5J5 111 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm12830F6XVH0 157 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Smrp1Q2MH31 260 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm12689Q8BQU9 117 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Pradc1Q9D9N8 188 aa9.69□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ighv5-6A0A075B5Q0 117 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 BB014433Q8C5R5 389 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 PspnO70300 156 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Defa26Q3L180 93 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Il19Q8CJ70 176 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 1700067P10RikG3X8U2 183 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 KalrnA2CG49 2964 aa9.68□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 CrygbP04344 175 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ifitm10Q8BR26 201 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 EppinQ9DA01 134 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Q9DAQ5 155 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Trav7d-3Q5R1I1 112 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Mrpl33Q9CQP0 65 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ly86O88188 162 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gemin7Q9CWY4 129 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Kiaa1549Q68FD9 1940 aa9.67□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm12845A0A0N4SUM5 588 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Tmem262D3Z338 116 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P04940 107 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P04941 107 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Ndufa3Q9CQ91 84 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms