RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Igkv1-133A0A0B4J1H8 120 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 CampP51437 172 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Gm10190Q8BSD7 107 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Malsu1Q9CWV0 228 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Trav6d-7A0A075B6B0 112 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Gm15056F6ZR08 88 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Rnase1P00683 149 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Plekhb2Q9QZC7 221 aa17.36■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Trav14d-1A0A075B6B1 121 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Trav21-dv12A0A075B6C4 109 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Ighv1-62-2A0A0A6YXZ4 119 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Fbxl15Q91W61 300 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Lyg1Q9D7Q0 197 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Shisal2aA2A9G7 189 aa17.35■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Ripply2Q2WG76 128 aa17.34■□□□□ 0.37
Upf3a-201ENSMUST00000043767 A130051J06RikQ8CAU1 227 aa17.34■□□□□ 0.37
Upf3a-201ENSMUST00000043767 9130213A22RikQ3V3T2 120 aa17.33■□□□□ 0.37
Upf3a-201ENSMUST00000043767 UrahQ9CRB3 118 aa17.33■□□□□ 0.37
Upf3a-201ENSMUST00000043767 F2rl1P55086 399 aa17.33■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Cox7a2lQ61387 111 aa17.33■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Igfn1Q3KNY0 2849 aa17.33■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Q24JP4 165 aa17.32■□□□□ 0.36
Upf3a-201ENSMUST00000043767 CdsnQ7TPC1 561 aa17.32■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Stxbp6Q8R3T5 210 aa17.32■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Olfr553Q7TRS6 326 aa17.31■□□□□ 0.36
Upf3a-201ENSMUST00000043767 3110018I06RikQ9CXS0 120 aa17.31■□□□□ 0.36
Upf3a-201ENSMUST00000043767 SelenokQ9JLJ1 94 aa17.31■□□□□ 0.36
Upf3a-201ENSMUST00000043767 AtrQ9JKK8 2635 aa17.31■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ighv12-3A0A075B5T1 117 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ighv1-80A0A075B5Y3 117 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 TbpP29037 316 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Pde6hP61249 83 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ifi27Q8C6G0 260 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Klf13Q9JJZ6 289 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Trav6n-6A0A075B6B2 114 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Rhox7bA6PW38 321 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Olfr235E9Q9Z6 312 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ly6g5bQ8K1T4 194 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Vps25Q9CQ80 176 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Tmem89Q9DA04 169 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Cml3Q9JIY8 226 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Itpr2Q9Z329 2701 aa17.3■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Igkv4-57-1A0A075B5M4 119 aa17.29■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ighv8-4A0A0A6YW26 117 aa17.29■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Gm765B2RVL9 189 aa17.29■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Smrp1Q2MH31 260 aa17.29■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Trdv1A0A075B657 112 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Vmn1r1E9PVR6 306 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Sub1P11031 127 aaKnown RBP17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Tdgf1P51865 171 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Rps20P60867 119 aaKnown RBP17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Tmem241Q3UME2 297 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Bsph1Q3UW26 133 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Foxc2Q61850 494 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ucn2Q99ML8 113 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Mrpl20Q9CQL4 149 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 EsdQ9R0P3 282 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Rnf183Q8QZS5 190 aa17.28■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Ighv1-52A0A0A6YXC3 117 aa17.27■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Mc5rP41149 325 aa17.27■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Olfr904Q7TRC9 310 aa17.27■□□□□ 0.36
Upf3a-201ENSMUST00000043767 Lypd1Q8BLC3 141 aa17.27■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Hyls1Q9CXX0 307 aa17.27■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Mrpl32Q9DCI9 187 aaKnown RBP17.27■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Hnrnpa3Q8BG05 379 aaKnown RBP17.26■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ufc1Q9CR09 167 aa17.26■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Dpm3Q9D1Q4 92 aa17.26■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Spcs1Q9D958 161 aa17.26■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Rbx1P62878 108 aa17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Slc35d2Q762D5 326 aa17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Rpl11Q9CXW4 178 aaKnown RBP17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Atp5iQ06185 71 aaKnown RBP17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Olfr761Q7TRJ0 323 aa17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Avpi1Q9D7H4 142 aa17.25■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ighv2-6A0A075B6A7 116 aa17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Gm21983D6RFS9 131 aa17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Mcrip2Q9CQB2 160 aaKnown RBP17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ighv1-53A0A075B5W3 117 aa17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 NipblQ6KCD5 2798 aaKnown RBP17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Odf3l1Q810P2 275 aa17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Trpt1Q8K3A2 249 aa17.24■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Saa3P04918 122 aa17.23■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ormdl3Q9CPZ6 153 aa17.23■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Gng7Q61016 68 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Wfdc15aQ8BH89 80 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ammecr1lQ8JZZ6 310 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Lyzl1Q9CPX3 148 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Borcs7Q9CRC6 105 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Rtl10D3YWW5 146 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 A930009A15RikG3UYI6 118 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 P0C913 63 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Cox8bP48772 70 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 AW146154Q3TPQ7 468 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Q4KKZ1 196 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Ang6Q5GAN0 147 aa17.22■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Tspo2Q9CRZ8 162 aa17.21■□□□□ 0.35
Upf3a-201ENSMUST00000043767 Gm45213A0A0U1RNZ6 101 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gp9O88186 177 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm5941Q497P9 117 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Hspg2Q05793 3707 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms