RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm20379A0A087WR34 119 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Gm2174F6ZVF2 133 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Ntf4Q80VU4 209 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Dido1Q8C9B9 2256 aaKnown RBP7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Trav14n-2A0A0G2JDF5 121 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Vmo1Q5SXG7 201 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Igkv4-53A0A0G2JFC6 119 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 CrygbP04344 175 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Vwc2lQ505H4 222 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Mapk1ip1lQ8BH93 242 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 GlrxQ9QUH0 107 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Plxna2P70207 1894 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Gm16381A0A1Y7VKT9 73 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Gm28038F7BCN9 126 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 CtsgP28293 261 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Zic4Q61467 341 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 E130218I03RikA0A0U1RNU5 63 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 A930003A15RikQ3U552 87 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Igkv3-1A0A075B5P1 119 aa7.85□□□□□ -1.15
Syne1-201ENSMUST00000041639 Ighv3-4A0A0A6YXF1 117 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Ube2e1P52482 193 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Tnrc6aQ3UHK8 1896 aaKnown RBP7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Gm7257D3YX25 99 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Sdhaf1Q3U276 118 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 TdhQ8K3F7 373 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Igkv6-15A0A140T8M5 115 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Wisp3D3Z5L9 354 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Ly86O88188 162 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Cd24P24807 76 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Lhfpl1Q80SV1 220 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Gm20517G3UVU6 152 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Tpsab1Q02844 273 aa7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Sorl1O88307 2215 aaKnown RBP7.84□□□□□ -1.15
Syne1-201ENSMUST00000041639 Dscaml1Q4VA61 2053 aa7.84□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ighv1-16A0A075B5U1 98 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 P01791 123 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ndufa4Q62425 82 aaKnown RBP7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Spg11Q3UHA3 2430 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm10192Q3V0S1 108 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Slc25a48Q8BW66 306 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Rai1Q61818 1889 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Minos1Q7TNS2 76 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ube2wQ8VDW4 151 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ighv6-7A0A0A6YWU3 119 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Xcl1P47993 114 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Shisa9Q9CZN4 424 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ang5Q5GAN1 145 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gatd1Q8BFQ8 220 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ndufa3Q9CQ91 84 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 ApomQ9Z1R3 190 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 DysfQ9ESD7 2090 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Tcf20Q9EPQ8 1987 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Trav14-2A0A075B694 121 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm28778A0A087WSK7 233 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 A730015C16RikQ8C992 119 aa7.83□□□□□ -1.16
Syne1-201ENSMUST00000041639 Arhgap21Q6DFV3 1944 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ighv1-39A0A075B5V5 117 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Trav14-3A0A075B607 120 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm5129F6YHA9 99 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 3110021N24RikJ3QMN2 152 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Tcf24V9GWT9 166 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm5294J3QP53 216 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Rpl32-psP17932 135 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Olfr312Q7TRZ9 308 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 LeprotO89013 131 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 P01794 123 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Runx1Q03347 451 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Cspg4Q8VHY0 2327 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Loxl1P97873 607 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm815Q3UWS2 115 aa7.82□□□□□ -1.16
Syne1-201ENSMUST00000041639 Igkv4-59A0A0B4J1I8 117 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Igkv4-81A0A0G2JEY5 119 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Igkv4-61A0A0G2JH00 117 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Q8R092 253 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Tpsg1Q9QUL7 311 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm15294V9GXA7 121 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Spag11Q8K4N2 71 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 HampQ9EQ21 83 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Tnfrsf13bQ9ET35 249 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm10604Q3V0X7 143 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 MplkipQ9D011 178 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ighv1-19A0A0A6YWX0 117 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 4930447F04RikA2AFR2 126 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 P01802 115 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Gm9747Q810H1 104 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Taf15Q8BQ46 557 aaKnown RBP7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Cd300eQ8K249 196 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Klhdc3Q8VEM9 382 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Chchd5Q9CQP3 110 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Ighv8-8A0A0A6YXQ0 119 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Igkv2-137A0A0B4J1H6 120 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Foxf1Q61080 378 aa7.81□□□□□ -1.16
Syne1-201ENSMUST00000041639 Col4a5Q63ZW6 1691 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 HelzQ6DFV5 1964 aaKnown RBP7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 Trav14d-3-dv8A0A075B619 120 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 Igkv4-72A0A0B4J1I4 117 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 Lect2O88803 151 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 NpbQ8K4P1 119 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 A0A286YE02 88 aa7.8□□□□□ -1.16
Syne1-201ENSMUST00000041639 Pear1Q8VIK5 1034 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms