RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 P04944 107 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Rpl27aP14115 148 aaKnown RBP7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Pde6hP61249 83 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ndufa4l2Q4FZG9 87 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Atp5lQ9CPQ8 103 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tmem89Q9DA04 169 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ramp3Q9WUP1 147 aa7.77□□□□□ -1.17
Copb1-201ENSMUST00000033012 Col6a3E9PWQ3 3284 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 MalO09198 153 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ly86O88188 162 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Prima1Q810F0 153 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Mettl26Q9DCS2 204 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ovol3D3YYM0 189 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ss18Q62280 418 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Shank1D3YZU1 2167 aa7.76□□□□□ -1.17
Copb1-201ENSMUST00000033012 Trav21-dv12A0A075B6C4 109 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Gm42674D3YUT9 64 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Gm20403G3UYB0 123 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tmem170bP86050 132 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Rbmy1bQ60990 380 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Msrb2Q78J03 175 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Triap1Q9D8Z2 76 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tnfaip6O08859 275 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Olfr312Q7TRZ9 308 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Plxdc1Q91ZV7 500 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Prss38Q3UKY7 322 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tmem30bQ8BHG3 353 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ube2wQ8VDW4 151 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Olfr1242Q8VGM6 306 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Cyyr1Q8VIH7 165 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Mrpl16Q99N93 251 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Fancd2osQ9D4K4 178 aa7.75□□□□□ -1.17
Copb1-201ENSMUST00000033012 Trav9d-1A0A075B699 112 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tmem95P0DJF3 176 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 S100a15aQ6S5I3 108 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Rab37Q9JKM7 223 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Il17bQ9QXT6 180 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ociad1Q9CRD0 247 aaKnown RBP7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Gm26938S4R185 226 aa7.74□□□□□ -1.17
Copb1-201ENSMUST00000033012 Morn5Q9DAI9 170 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Trav7d-3Q5R1I1 112 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Trav4d-3A0A075B625 110 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 9830107B12RikD3Z5D6 160 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Rpl32-psP17932 135 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Cdkn1aP39689 159 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Tmem101Q91VP7 257 aa7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Chd7A2AJK6 2986 aaKnown RBP7.73□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ighv1-23A0A0A6YVW3 117 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Gm11444F6QMA6 170 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Lrcol1Q3URS3 161 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Rasl11bQ922H7 247 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Timm23Q9WTQ8 209 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Dmxl1Q6PNC0 3013 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 VcanQ62059 3357 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ighv7-4A0A0A6YXL5 121 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Dmrt3Q80WT2 476 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ormdl2Q9CQZ0 153 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 AtrxQ61687 2476 aaKnown RBP7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Trav7n-5A0A075B604 112 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Atp5g3P56384 141 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 G430049J08RikQ3TL09 166 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Ndufa3Q9CQ91 84 aa7.72□□□□□ -1.17
Copb1-201ENSMUST00000033012 Prss58Q8BW11 241 aa7.71□□□□□ -1.17
Copb1-201ENSMUST00000033012 Klk15Q8CGR4 254 aa7.71□□□□□ -1.17
Copb1-201ENSMUST00000033012 Arfgef3Q3UGY8 2170 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Prrc2aQ7TSC1 2158 aaKnown RBP7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Smim10l1A0A087WNQ7 89 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 3110021N24RikJ3QMN2 152 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Rnf5O35445 180 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Egr2P08152 470 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Defa1P11477 93 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 RflnaQ7TS73 204 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Gm9949Q8C9F4 104 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Fhl4Q8CDC8 279 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Vmn1r62Q8R2C0 300 aa7.71□□□□□ -1.18
Copb1-201ENSMUST00000033012 Gm933J3QPC1 141 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Asphd1Q2TA57 360 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Pip4p1Q3TWL2 284 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Onecut1O08755 465 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Ly6c1P0CW02 131 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Foxi2Q3I5G5 311 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Defa26Q3L180 93 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Sdhaf1Q3U276 118 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Ccl8Q9Z121 97 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 FrylF8VQ05 3007 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Dchs1E9PVD3 3291 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Hcfc1Q61191 2045 aaKnown RBP7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Ighv1-9A0A0A6YW37 117 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Gm17660B9UIU9 90 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 P04219 140 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Rps28P62858 69 aaKnown RBP7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Ubtd1Q91WB7 227 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 CstadQ9D245 104 aa7.7□□□□□ -1.18
Copb1-201ENSMUST00000033012 Zfp407G3UVV3 2246 aa7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Defa16P50714 93 aa7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Gm12888Q3UW77 119 aa7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Fxyd3Q61835 88 aa7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Ndufa4Q62425 82 aaKnown RBP7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Cdx4Q07424 282 aa7.69□□□□□ -1.18
Copb1-201ENSMUST00000033012 Tex26Q0VB26 296 aa7.69□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms