RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Gm5129F6YHA9 99 aa8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 Zfp36P22893 319 aaKnown RBP8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 Tmem30bQ8BHG3 353 aa8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ndufa3Q9CQ91 84 aa8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 Pkd1l3Q2EG98 2201 aa8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 PolP10400 120 aa8.73□□□□□ -1.01
Ciita-201ENSMUST00000023147 Igkv6-23A0A140T8N5 115 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Fxyd7P59648 80 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ube2bP63147 152 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Pear1Q8VIK5 1034 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Fam216aQ9DB54 251 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ly6g6dQ9Z1Q3 135 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Trav14d-1A0A075B6B1 121 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Mpv17l2Q8VIK2 200 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ear14F6YUX7 155 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 RtbdnQ8QZY4 247 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Zc2hc1bQ9D534 172 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Pfn2Q9JJV2 140 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Fam110dQ80X91 271 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 COA4Q8BT51 87 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Slc25a48Q8BW66 306 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ss18l2Q9D174 77 aa8.72□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ighv1-58A0A075B5W9 117 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ndufa1O35683 70 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 MplkipQ9D011 178 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ighv5-12-4A0A0A6YWG4 117 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 Wdr86D3Z757 380 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 3110082J24RikF6Z6Z2 108 aa8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 Mrpl53Q9D1H8 118 aaKnown RBP8.71□□□□□ -1.01
Ciita-201ENSMUST00000023147 Ighv8-6A0A0A6YXA3 118 aa8.71□□□□□ -1.02
Ciita-201ENSMUST00000023147 Atp6v0bQ91V37 205 aa8.71□□□□□ -1.02
Ciita-201ENSMUST00000023147 CadB2RQC6 2225 aa8.71□□□□□ -1.02
Ciita-201ENSMUST00000023147 Cdcp2Q8BQH6 427 aa8.71□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv3-8A0A075B5T0 131 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Defb3Q9WTL0 63 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Klk11Q9QYN3 276 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Rai1Q61818 1889 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Igkv4-74A0A0B4J1I3 119 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 A730015C16RikQ8C992 119 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Tm2d1Q99MB3 208 aa8.7□□□□□ -1.02
Ciita-201ENSMUST00000023147 Igkv19-93A0A0G2JFZ3 115 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Igfbpl1Q80W15 270 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Dpm3Q9D1Q4 92 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Sp5Q9JHX2 398 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv1-9A0A0A6YW37 117 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv1-62-3P01754 117 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Tmem190Q9D2E9 166 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Med12A2AGH6 2190 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Tmem92B7ZWI3 162 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Insl3O09107 122 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Edn3P48299 214 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Foxi1Q922I5 372 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Zfp36l1P23950 338 aa8.69□□□□□ -1.02
Ciita-201ENSMUST00000023147 Znf740Q6NZQ6 180 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Sorl1O88307 2215 aaKnown RBP8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Rbm3O89086 153 aaKnown RBP8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv1-39A0A075B5V5 117 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv1-19A0A0A6YWX0 117 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Fam240bJ3QMB3 78 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Cox6a1P43024 111 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ccl21aP84444 133 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ccl21bP86792 133 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ccl21cP86793 133 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Fstl3Q9EQC7 256 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Nav3Q80TN7 2359 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Gm9513B3GLJ6 99 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 P01786 117 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Dand5Q76LW6 185 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Atp6v0e1Q9CQD8 81 aa8.68□□□□□ -1.02
Ciita-201ENSMUST00000023147 Trav14n-2A0A0G2JDF5 121 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Psmb11Q8BG41 302 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Prr3Q811B5 190 aaKnown RBP8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv3-4A0A0A6YXF1 117 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv1-62-2A0A0A6YXZ4 119 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 HelzQ6DFV5 1964 aaKnown RBP8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Trav12d-3A0A075B6A4 115 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 BikO70337 150 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 C330021F23RikQ8C7T0 141 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Lrrk1Q3UHC2 2014 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Trav12-3A0A075B648 115 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Gm37388A0A0A6YY46 143 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 Igkv5-37A0A140T8N4 115 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 P01738 130 aa8.67□□□□□ -1.02
Ciita-201ENSMUST00000023147 FancmQ8BGE5 2021 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Igkv8-26A0A075B5N5 123 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Gm815Q3UWS2 115 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 P06330 118 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 P04946 108 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 A930003A15RikQ3U552 87 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Srsf2Q62093 221 aaKnown RBP8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ly6g5bQ8K1T4 194 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Tmem52Q9D702 196 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Morn5Q9DAI9 170 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 P01790 122 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 C1qtnf5Q8K479 243 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Spry4Q9WTP2 300 aa8.66□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ube2e1P52482 193 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ndufc2Q9CQ54 120 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 Crybg1A0A0G2JG52 2065 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 NpsP0C0P8 89 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms