RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 P01725 110 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 AamdcQ8R0P4 122 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Tppp3Q9CRB6 176 aaKnown RBP12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Cep295Q8BQ48 2412 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ighv7-3A0A075B5R2 120 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Vamp8O70404 101 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm10192Q3V0S1 108 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Il22ra1Q80XZ4 581 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Tspan13Q9D8C2 204 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Cdx4Q07424 282 aa12.9□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Spock3Q8BKV0 436 aa12.9□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Prss29Q99MS4 279 aa12.9□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Vmn1r62Q8R2C0 300 aa12.9□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Q9D8Q6 235 aa12.9□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Npc2Q9Z0J0 149 aa12.9□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Cd59aO55186 123 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 SmcpP15265 143 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Srp14P16254 110 aaKnown RBP12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Olfr981Q8VEU2 310 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Mustn1Q99JI1 82 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Prrc2aQ7TSC1 2158 aaKnown RBP12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Ighv1-22A0A075B5U7 117 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 LoxP28301 411 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Khdc1aQ3UWR2 166 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Prima1Q810F0 153 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Esp3J3QN49 87 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm5294J3QP53 216 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Defa37K9J724 93 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Defa5P28312 93 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm4763Q8CFJ5 196 aa12.89□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Svep1A2AVA0 3567 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm20481G3UXK4 153 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 P01812 117 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Ube2l6Q9QZU9 153 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Timm23Q9WTQ8 209 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 P01783 136 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 TshbP12656 138 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Hspe1Q64433 102 aaKnown RBP12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Vsig8Q6P3A4 417 aa12.88□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm45753A0A1C7CYU8 86 aa12.87□□□□□ -0.35
Ctcf-201ENSMUST00000005841 P06334 169 aa12.87□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Olfr873Q8VFJ0 319 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Bub3Q9WVA3 326 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Rnf182Q8C432 247 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm5105Q8C6Y9 112 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 8030423J24RikQ9CX45 142 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Arhgap32Q811P8 2089 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 BatfO35284 125 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Ccl3P10855 92 aa12.86□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Ighv12-3A0A075B5T1 117 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm28269A0A087WSG3 125 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 SrarpQ3ULG3 163 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Defa24Q5G865 93 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 RpeQ8VEE0 228 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Plxdc1Q91ZV7 500 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 ColqO35348 457 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 FshbQ60687 130 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Tmem30bQ8BHG3 353 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Gm10118Q8C8J5 116 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Rbmxl2Q9DAE2 385 aaKnown RBP12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Esp23A8R0V5 104 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Odf1Q61999 247 aa12.85□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Ighv3-4A0A0A6YXF1 117 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Umad1E0CX23 159 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Fxyd7P59648 80 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 TcraP01849 138 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Trav19A0A0B4J1K4 119 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Higd1cQ76I25 96 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Prb1Q91X93 504 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Q9DAB9 146 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Nit2Q9JHW2 276 aa12.84□□□□□ -0.35
Ctcf-201ENSMUST00000005841 NpwA0A1L1STR8 176 aa12.83□□□□□ -0.35
Ctcf-201ENSMUST00000005841 P01802 115 aa12.83□□□□□ -0.35
Ctcf-201ENSMUST00000005841 Sdhaf1Q3U276 118 aa12.83□□□□□ -0.35
Ctcf-201ENSMUST00000005841 AtrxQ61687 2476 aaKnown RBP12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 4930447F04RikA2AFR2 126 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Socs3O35718 225 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Gm45717A0A1B0GT68 152 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Tmem95P0DJF3 176 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Q9CX25 107 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Pgpep1Q9ESW8 209 aa12.83□□□□□ -0.36
Ctcf-201ENSMUST00000005841 BC025920Q3US60 128 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 RhohQ9D3G9 191 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Prrc2cQ3TLH4 2846 aaKnown RBP12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Gm5629P06327 117 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Il1f10Q8R459 152 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ighv14-2A0A075B5R7 117 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Igkv4-57A0A0A6YYE7 117 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Igkv4-70A0A0B4J1I5 116 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Olfr312Q7TRZ9 308 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Pla2g2dQ9WVF6 144 aa12.82□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Mrpl33Q9CQP0 65 aa12.81□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Brd3osA0A1B0GRB6 84 aa12.81□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Trav6-2Q5R1I4 113 aa12.81□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ighv1-80A0A075B5Y3 117 aa12.81□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ighv1-81A0A075B5Y4 117 aa12.81□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Igkv4-81A0A0G2JEY5 119 aa12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Fhl1P97447 280 aaKnown RBP12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ndufa4Q62425 82 aaKnown RBP12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ndufb3Q9CQZ6 104 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 68.6 ms