RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
PHGDH-210ENST00000641115 MT1HP80294 61 aa9.66□□□□□ -0.86
PHGDH-210ENST00000641115 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
PHGDH-210ENST00000641115 SPTSSBQ8NFR3 76 aa9.64□□□□□ -0.87
PHGDH-210ENST00000641115 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
PHGDH-210ENST00000641115 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
PHGDH-210ENST00000641115 M0R2T5 61 aa9.6□□□□□ -0.87
PHGDH-210ENST00000641115 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-210ENST00000641115 RPS28P62857 69 aaKnown RBP9.5□□□□□ -0.89
PHGDH-210ENST00000641115 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-210ENST00000641115 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
PHGDH-210ENST00000641115 H0YAA0 97 aa9.35□□□□□ -0.91
PHGDH-210ENST00000641115 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-210ENST00000641115 SEC61GP60059 68 aa9.31□□□□□ -0.92
PHGDH-210ENST00000641115 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
PHGDH-210ENST00000641115 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-210ENST00000641115 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
PHGDH-210ENST00000641115 V9GYY9 64 aa9.28□□□□□ -0.92
PHGDH-210ENST00000641115 A0A1B0GU69 56 aa9.27□□□□□ -0.92
PHGDH-210ENST00000641115 Q1T7F1 81 aa9.24□□□□□ -0.93
PHGDH-210ENST00000641115 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
PHGDH-210ENST00000641115 PRR15LQ9BU68 103 aa9.23□□□□□ -0.93
PHGDH-210ENST00000641115 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
PHGDH-210ENST00000641115 MT2AP02795 61 aa9.2□□□□□ -0.94
PHGDH-210ENST00000641115 P0C880 135 aa9.19□□□□□ -0.94
PHGDH-210ENST00000641115 KRTAP10-10P60014 251 aa9.15□□□□□ -0.94
PHGDH-210ENST00000641115 MT1FP04733 61 aa9.14□□□□□ -0.95
PHGDH-210ENST00000641115 PSPHP1O15172 72 aa9.11□□□□□ -0.95
PHGDH-210ENST00000641115 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
PHGDH-210ENST00000641115 A0A1B0GU33 70 aa9.05□□□□□ -0.96
PHGDH-210ENST00000641115 R4GN34 69 aa9.03□□□□□ -0.96
PHGDH-210ENST00000641115 Q5VV11 94 aa9.01□□□□□ -0.97
PHGDH-210ENST00000641115 M0QZ58 72 aa8.99□□□□□ -0.97
PHGDH-210ENST00000641115 UQCR11O14957 56 aa8.94□□□□□ -0.98
PHGDH-210ENST00000641115 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
PHGDH-210ENST00000641115 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.99
PHGDH-210ENST00000641115 SPATA8Q6RVD6 105 aa8.9□□□□□ -0.99
PHGDH-210ENST00000641115 SPRR2GQ9BYE4 73 aa8.9□□□□□ -0.99
PHGDH-210ENST00000641115 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
PHGDH-210ENST00000641115 A6NED7 52 aa8.86□□□□□ -0.99
PHGDH-210ENST00000641115 LINC01554Q52M75 96 aa8.83□□□□□ -1
PHGDH-210ENST00000641115 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
PHGDH-210ENST00000641115 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
PHGDH-210ENST00000641115 A0A0D9SG42 100 aa8.76□□□□□ -1.01
PHGDH-210ENST00000641115 A8MU10 97 aa8.72□□□□□ -1.01
PHGDH-210ENST00000641115 LCE2BO14633 110 aa8.71□□□□□ -1.02
PHGDH-210ENST00000641115 KRTAP19-8Q3LI54 63 aa8.7□□□□□ -1.02
PHGDH-210ENST00000641115 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-210ENST00000641115 A6NN06 94 aa8.65□□□□□ -1.02
PHGDH-210ENST00000641115 CDC42SE1Q9NRR8 79 aa8.64□□□□□ -1.03
PHGDH-210ENST00000641115 MT1BP07438 61 aa8.58□□□□□ -1.04
PHGDH-210ENST00000641115 SPINT4Q6UDR6 99 aa8.58□□□□□ -1.04
PHGDH-210ENST00000641115 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
PHGDH-210ENST00000641115 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
PHGDH-210ENST00000641115 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
PHGDH-210ENST00000641115 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
PHGDH-210ENST00000641115 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
PHGDH-210ENST00000641115 K7ERS5 55 aa8.5□□□□□ -1.05
PHGDH-210ENST00000641115 USH2AO75445 5202 aa8.45□□□□□ -1.06
PHGDH-210ENST00000641115 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
PHGDH-210ENST00000641115 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
PHGDH-210ENST00000641115 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
PHGDH-210ENST00000641115 CRCT1Q9UGL9 99 aa8.32□□□□□ -1.08
PHGDH-210ENST00000641115 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
PHGDH-210ENST00000641115 KRTAP19-6Q3LI70 58 aa8.27□□□□□ -1.09
PHGDH-210ENST00000641115 MT1XP80297 61 aa8.25□□□□□ -1.09
PHGDH-210ENST00000641115 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
PHGDH-210ENST00000641115 PRO0628Q9UI54 55 aa8.21□□□□□ -1.1
PHGDH-210ENST00000641115 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
PHGDH-210ENST00000641115 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
PHGDH-210ENST00000641115 ROMO1P60602 79 aa8.05□□□□□ -1.12
PHGDH-210ENST00000641115 FCGBPQ9Y6R7 5405 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-210ENST00000641115 TNP1P09430 55 aa7.96□□□□□ -1.13
PHGDH-210ENST00000641115 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
PHGDH-210ENST00000641115 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-210ENST00000641115 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
PHGDH-210ENST00000641115 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
PHGDH-210ENST00000641115 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-210ENST00000641115 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
PHGDH-210ENST00000641115 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
PHGDH-210ENST00000641115 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
PHGDH-210ENST00000641115 KTN1-AS1Q86SY8 53 aa7.65□□□□□ -1.18
PHGDH-210ENST00000641115 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
PHGDH-210ENST00000641115 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
PHGDH-210ENST00000641115 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
PHGDH-210ENST00000641115 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
PHGDH-210ENST00000641115 KMT2DO14686 5537 aa7.58□□□□□ -1.2
PHGDH-210ENST00000641115 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
PHGDH-210ENST00000641115 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
PHGDH-210ENST00000641115 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
PHGDH-210ENST00000641115 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
PHGDH-210ENST00000641115 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
PHGDH-210ENST00000641115 KRTAP19-7Q3SYF9 63 aa7.36□□□□□ -1.23
PHGDH-210ENST00000641115 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.24
PHGDH-210ENST00000641115 KRTAP5-9P26371 169 aa7.32□□□□□ -1.24
PHGDH-210ENST00000641115 KRTAP6-3Q3LI67 103 aa7.31□□□□□ -1.24
PHGDH-210ENST00000641115 MT1EP04732 61 aa7.26□□□□□ -1.25
PHGDH-210ENST00000641115 MUC12Q9UKN1 5478 aa7.25□□□□□ -1.25
PHGDH-210ENST00000641115 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
PHGDH-210ENST00000641115 MT1LQ93083 61 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms