RNA–Protein interactions for RNA: ENST00000639716.1

KCNMA1-269, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-269ENST00000639716 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
KCNMA1-269ENST00000639716 H0YAA0 97 aa3.85□□□□□ -1.79
KCNMA1-269ENST00000639716 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
KCNMA1-269ENST00000639716 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
KCNMA1-269ENST00000639716 Q6ZSA8 131 aa3.84□□□□□ -1.8
KCNMA1-269ENST00000639716 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
KCNMA1-269ENST00000639716 TPRXLQ17RH7 258 aa3.83□□□□□ -1.8
KCNMA1-269ENST00000639716 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
KCNMA1-269ENST00000639716 LCE2BO14633 110 aa3.81□□□□□ -1.8
KCNMA1-269ENST00000639716 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
KCNMA1-269ENST00000639716 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
KCNMA1-269ENST00000639716 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
KCNMA1-269ENST00000639716 KRTAP13-2Q52LG2 175 aa3.78□□□□□ -1.8
KCNMA1-269ENST00000639716 HSPG2P98160 4391 aa3.77□□□□□ -1.81
KCNMA1-269ENST00000639716 FAT1Q14517 4588 aa3.77□□□□□ -1.81
KCNMA1-269ENST00000639716 TNXBP22105 4242 aa3.74□□□□□ -1.81
KCNMA1-269ENST00000639716 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
KCNMA1-269ENST00000639716 KIAA1109Q2LD37 5005 aa3.73□□□□□ -1.81
KCNMA1-269ENST00000639716 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
KCNMA1-269ENST00000639716 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
KCNMA1-269ENST00000639716 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
KCNMA1-269ENST00000639716 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
KCNMA1-269ENST00000639716 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
KCNMA1-269ENST00000639716 KRTAP4-5Q9BYR2 181 aa3.67□□□□□ -1.82
KCNMA1-269ENST00000639716 RYR1P21817 5038 aa3.67□□□□□ -1.82
KCNMA1-269ENST00000639716 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.82
KCNMA1-269ENST00000639716 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
KCNMA1-269ENST00000639716 M0R2T5 61 aa3.62□□□□□ -1.83
KCNMA1-269ENST00000639716 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
KCNMA1-269ENST00000639716 RYR3Q15413 4870 aa3.62□□□□□ -1.83
KCNMA1-269ENST00000639716 S4R3F8 94 aa3.61□□□□□ -1.83
KCNMA1-269ENST00000639716 INE1O15225 51 aa3.6□□□□□ -1.83
KCNMA1-269ENST00000639716 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
KCNMA1-269ENST00000639716 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
KCNMA1-269ENST00000639716 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
KCNMA1-269ENST00000639716 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
KCNMA1-269ENST00000639716 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
KCNMA1-269ENST00000639716 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
KCNMA1-269ENST00000639716 XP32Q5T750 250 aa3.46□□□□□ -1.86
KCNMA1-269ENST00000639716 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
KCNMA1-269ENST00000639716 RYR2Q92736 4967 aa3.45□□□□□ -1.86
KCNMA1-269ENST00000639716 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
KCNMA1-269ENST00000639716 HERC2O95714 4834 aa3.43□□□□□ -1.86
KCNMA1-269ENST00000639716 LRP2P98164 4655 aa3.42□□□□□ -1.86
KCNMA1-269ENST00000639716 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
KCNMA1-269ENST00000639716 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
KCNMA1-269ENST00000639716 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
KCNMA1-269ENST00000639716 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
KCNMA1-269ENST00000639716 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
KCNMA1-269ENST00000639716 M0QZ58 72 aa3.35□□□□□ -1.87
KCNMA1-269ENST00000639716 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.88
KCNMA1-269ENST00000639716 HERC1Q15751 4861 aa3.33□□□□□ -1.88
KCNMA1-269ENST00000639716 LPAP08519 4548 aa3.33□□□□□ -1.88
KCNMA1-269ENST00000639716 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
KCNMA1-269ENST00000639716 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
KCNMA1-269ENST00000639716 MUC2Q02817 5179 aa3.33□□□□□ -1.88
KCNMA1-269ENST00000639716 MUC17Q685J3 4493 aa3.3□□□□□ -1.88
KCNMA1-269ENST00000639716 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
KCNMA1-269ENST00000639716 BIRC6Q9NR09 4857 aa3.27□□□□□ -1.89
KCNMA1-269ENST00000639716 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
KCNMA1-269ENST00000639716 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
KCNMA1-269ENST00000639716 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
KCNMA1-269ENST00000639716 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
KCNMA1-269ENST00000639716 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
KCNMA1-269ENST00000639716 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
KCNMA1-269ENST00000639716 TNP1P09430 55 aa3.16□□□□□ -1.9
KCNMA1-269ENST00000639716 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
KCNMA1-269ENST00000639716 HMCN2Q8NDA2 5059 aa3.02□□□□□ -1.93
KCNMA1-269ENST00000639716 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
KCNMA1-269ENST00000639716 USH2AO75445 5202 aa2.94□□□□□ -1.94
KCNMA1-269ENST00000639716 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.94
KCNMA1-269ENST00000639716 MT1HP80294 61 aa2.89□□□□□ -1.95
KCNMA1-269ENST00000639716 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
KCNMA1-269ENST00000639716 MT1FP04733 61 aa2.84□□□□□ -1.95
KCNMA1-269ENST00000639716 MT2AP02795 61 aa2.82□□□□□ -1.96
KCNMA1-269ENST00000639716 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
KCNMA1-269ENST00000639716 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
KCNMA1-269ENST00000639716 KMT2DO14686 5537 aa2.76□□□□□ -1.97
KCNMA1-269ENST00000639716 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
KCNMA1-269ENST00000639716 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
KCNMA1-269ENST00000639716 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
KCNMA1-269ENST00000639716 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
KCNMA1-269ENST00000639716 KRTAP19-1Q8IUB9 90 aa2.68□□□□□ -1.98
KCNMA1-269ENST00000639716 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
KCNMA1-269ENST00000639716 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
KCNMA1-269ENST00000639716 KRTAP9-8Q9BYQ0 159 aa2.67□□□□□ -1.98
KCNMA1-269ENST00000639716 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
KCNMA1-269ENST00000639716 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP4-8Q9BYQ9 185 aa2.64□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP9-6A0A140TA67 174 aa2.62□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
KCNMA1-269ENST00000639716 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
KCNMA1-269ENST00000639716 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP19-8Q3LI54 63 aa2.59□□□□□ -1.99
KCNMA1-269ENST00000639716 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
KCNMA1-269ENST00000639716 MT1BP07438 61 aa2.57□□□□□ -2
KCNMA1-269ENST00000639716 KRTAP12-3P60328 96 aa2.56□□□□□ -2
KCNMA1-269ENST00000639716 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms