RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755		F8W1H4	67 aa		5.12	□□□□□ -1.59
PAX6-238	ENST00000638755	BPY2	O14599	106 aa		5.12	□□□□□ -1.59
PAX6-238	ENST00000638755	LCE1D	Q5T752	114 aa		5.12	□□□□□ -1.59
PAX6-238	ENST00000638755	KRTAP8-1	Q8IUC2	63 aa		5.12	□□□□□ -1.59
PAX6-238	ENST00000638755	KRTAP4-7	Q9BYR0	210 aa		5.11	□□□□□ -1.59
PAX6-238	ENST00000638755	C5orf47	Q569G3	176 aa		5.09	□□□□□ -1.59
PAX6-238	ENST00000638755	TMEM254	Q8TBM7	123 aa		5.08	□□□□□ -1.6
PAX6-238	ENST00000638755	hDV103S1	A0JD37	113 aa		5.07	□□□□□ -1.6
PAX6-238	ENST00000638755	MRPL34	Q9BQ48	92 aa	Known RBP	5.07	□□□□□ -1.6
PAX6-238	ENST00000638755	UBL5	Q9BZL1	73 aa		5.06	□□□□□ -1.6
PAX6-238	ENST00000638755	DST	Q03001	7570 aa	Known RBP	5.05	□□□□□ -1.6
PAX6-238	ENST00000638755	NDUFS5	O43920	106 aa		5.04	□□□□□ -1.6
PAX6-238	ENST00000638755	CASC2	Q6XLA1	102 aa		5.02	□□□□□ -1.61
PAX6-238	ENST00000638755		Q5W150	140 aa		5	□□□□□ -1.61
PAX6-238	ENST00000638755	HCG22	E2RYF7	251 aa		4.99	□□□□□ -1.61
PAX6-238	ENST00000638755	KLKP1	Q107X0	134 aa		4.99	□□□□□ -1.61
PAX6-238	ENST00000638755	KRTAP4-9	Q9BYQ8	210 aa		4.99	□□□□□ -1.61
PAX6-238	ENST00000638755	CXCL6	P80162	114 aa		4.96	□□□□□ -1.62
PAX6-238	ENST00000638755	IGKV2D-30	A0A075B6S6	120 aa		4.95	□□□□□ -1.62
PAX6-238	ENST00000638755	IGKV2-30	P06310	120 aa		4.95	□□□□□ -1.62
PAX6-238	ENST00000638755	ACYP1	P07311	99 aa		4.94	□□□□□ -1.62
PAX6-238	ENST00000638755	CSAG1	Q6PB30	78 aa		4.94	□□□□□ -1.62
PAX6-238	ENST00000638755	FAM240A	A0A1B0GVK7	77 aa		4.93	□□□□□ -1.62
PAX6-238	ENST00000638755	C4orf26	Q17RF5	130 aa		4.93	□□□□□ -1.62
PAX6-238	ENST00000638755	PRO2289	Q9P1D8	64 aa		4.93	□□□□□ -1.62
PAX6-238	ENST00000638755		S4R3F8	94 aa		4.9	□□□□□ -1.63
PAX6-238	ENST00000638755	MT1X	P80297	61 aa		4.89	□□□□□ -1.63
PAX6-238	ENST00000638755	C7orf65	Q6ZTY9	151 aa		4.89	□□□□□ -1.63
PAX6-238	ENST00000638755	LCA10	Q71F78	164 aa		4.89	□□□□□ -1.63
PAX6-238	ENST00000638755	KRTAP4-2	Q9BYR5	136 aa		4.88	□□□□□ -1.63
PAX6-238	ENST00000638755		A0A087WVE0	104 aa		4.87	□□□□□ -1.63
PAX6-238	ENST00000638755	HIST1H4A	P62805	103 aa	Known RBP	4.87	□□□□□ -1.63
PAX6-238	ENST00000638755	LCE4A	Q5TA78	99 aa		4.86	□□□□□ -1.63
PAX6-238	ENST00000638755	ATP5EP2	Q5VTU8	51 aa		4.86	□□□□□ -1.63
PAX6-238	ENST00000638755	KRTAP12-2	P59991	146 aa		4.85	□□□□□ -1.63
PAX6-238	ENST00000638755	LINC00643	Q86TS7	51 aa		4.85	□□□□□ -1.63
PAX6-238	ENST00000638755	CRIPT	Q9P021	101 aa		4.85	□□□□□ -1.63
PAX6-238	ENST00000638755		K7ERU9	68 aa		4.84	□□□□□ -1.63
PAX6-238	ENST00000638755	TP53AIP1	Q9HCN2	124 aa		4.84	□□□□□ -1.63
PAX6-238	ENST00000638755	HMCN1	Q96RW7	5635 aa		4.83	□□□□□ -1.64
PAX6-238	ENST00000638755		J3QR89	54 aa		4.83	□□□□□ -1.64
PAX6-238	ENST00000638755	AHNAK2	Q8IVF2	5795 aa		4.82	□□□□□ -1.64
PAX6-238	ENST00000638755	KRTAP3-1	Q9BYR8	98 aa		4.81	□□□□□ -1.64
PAX6-238	ENST00000638755	KRTAP19-4	Q3LI73	84 aa		4.79	□□□□□ -1.64
PAX6-238	ENST00000638755	KRTAP4-11	Q9BYQ6	195 aa		4.79	□□□□□ -1.64
PAX6-238	ENST00000638755	TRAV22	A0A0B4J277	110 aa		4.78	□□□□□ -1.64
PAX6-238	ENST00000638755	CYP4F30P	Q9H0H9	118 aa		4.77	□□□□□ -1.65
PAX6-238	ENST00000638755	C1orf64	Q8NEQ6	169 aa		4.76	□□□□□ -1.65
PAX6-238	ENST00000638755		H0Y9P7	68 aa		4.75	□□□□□ -1.65
PAX6-238	ENST00000638755	UQCRQ	O14949	82 aa		4.75	□□□□□ -1.65
PAX6-238	ENST00000638755	PLAC4	Q8WY50	150 aa		4.74	□□□□□ -1.65
PAX6-238	ENST00000638755	LOC101927531	A0A1B0GV80	90 aa		4.73	□□□□□ -1.65
PAX6-238	ENST00000638755	OCR1	Q9BZK8	76 aa		4.73	□□□□□ -1.65
PAX6-238	ENST00000638755	MT-ATP8	P03928	68 aa		4.7	□□□□□ -1.66
PAX6-238	ENST00000638755	KRTAP5-10	Q6L8G5	202 aa		4.7	□□□□□ -1.66
PAX6-238	ENST00000638755	ATOX1	O00244	68 aa		4.69	□□□□□ -1.66
PAX6-238	ENST00000638755	LINC00208	Q96KT6	92 aa		4.69	□□□□□ -1.66
PAX6-238	ENST00000638755		A8MUN3	132 aa		4.68	□□□□□ -1.66
PAX6-238	ENST00000638755	KRTAP10-7	P60409	375 aa	Predicted RBP	4.68	□□□□□ -1.66
PAX6-238	ENST00000638755	LCE5A	Q5TCM9	118 aa		4.67	□□□□□ -1.66
PAX6-238	ENST00000638755	MT4	P47944	62 aa		4.65	□□□□□ -1.67
PAX6-238	ENST00000638755	MP68	P56378	58 aa		4.65	□□□□□ -1.67
PAX6-238	ENST00000638755	SCGB1A1	P11684	91 aa		4.64	□□□□□ -1.67
PAX6-238	ENST00000638755	KRTAP10-12	P60413	245 aa		4.62	□□□□□ -1.67
PAX6-238	ENST00000638755	KRTAP5-7	Q6L8G8	165 aa		4.59	□□□□□ -1.67
PAX6-238	ENST00000638755		H3BPC8	53 aa		4.57	□□□□□ -1.68
PAX6-238	ENST00000638755	TRAV7	A0A075B6U4	112 aa		4.55	□□□□□ -1.68
PAX6-238	ENST00000638755	SPRR5	A0A1B0GTR4	108 aa		4.55	□□□□□ -1.68
PAX6-238	ENST00000638755	ADM2	Q7Z4H4	148 aa		4.55	□□□□□ -1.68
PAX6-238	ENST00000638755		H0YAA0	97 aa		4.54	□□□□□ -1.68
PAX6-238	ENST00000638755	NDUFC1	O43677	76 aa		4.52	□□□□□ -1.69
PAX6-238	ENST00000638755		H3BS24	57 aa		4.51	□□□□□ -1.69
PAX6-238	ENST00000638755	SMIM20	Q8N5G0	67 aa		4.51	□□□□□ -1.69
PAX6-238	ENST00000638755	DMAC1	Q96GE9	116 aa		4.5	□□□□□ -1.69
PAX6-238	ENST00000638755	SNURF	Q9Y675	71 aa		4.5	□□□□□ -1.69
PAX6-238	ENST00000638755	PCP4	P48539	62 aa		4.48	□□□□□ -1.69
PAX6-238	ENST00000638755		R4GN34	69 aa		4.48	□□□□□ -1.69
PAX6-238	ENST00000638755	KRTAP5-3	Q6L8H2	238 aa		4.46	□□□□□ -1.7
PAX6-238	ENST00000638755	KRTAP19-3	Q7Z4W3	81 aa		4.46	□□□□□ -1.7
PAX6-238	ENST00000638755	ANAPC13	Q9BS18	74 aa		4.46	□□□□□ -1.7
PAX6-238	ENST00000638755	C20orf197	Q8N268	126 aa		4.44	□□□□□ -1.7
PAX6-238	ENST00000638755	SERP2	Q8N6R1	65 aa		4.44	□□□□□ -1.7
PAX6-238	ENST00000638755	LINC01554	Q52M75	96 aa		4.43	□□□□□ -1.7
PAX6-238	ENST00000638755	CYSTM1	Q9H1C7	97 aa		4.43	□□□□□ -1.7
PAX6-238	ENST00000638755		M0QZ58	72 aa		4.42	□□□□□ -1.7
PAX6-238	ENST00000638755		P0C880	135 aa		4.4	□□□□□ -1.71
PAX6-238	ENST00000638755	ACYP2	P14621	99 aa		4.39	□□□□□ -1.71
PAX6-238	ENST00000638755	MT1E	P04732	61 aa		4.37	□□□□□ -1.71
PAX6-238	ENST00000638755	KRTAP19-7	Q3SYF9	63 aa		4.37	□□□□□ -1.71
PAX6-238	ENST00000638755	COX7C	P15954	63 aa		4.36	□□□□□ -1.71
PAX6-238	ENST00000638755	CCDC179	H3BU77	68 aa		4.35	□□□□□ -1.71
PAX6-238	ENST00000638755	KRTAP5-4	Q6L8H1	288 aa		4.34	□□□□□ -1.71
PAX6-238	ENST00000638755	SPANXA2-OT1	Q8N9U9	137 aa		4.34	□□□□□ -1.71
PAX6-238	ENST00000638755	CHKB-CPT1B	H3BT56	60 aa		4.32	□□□□□ -1.72
PAX6-238	ENST00000638755	MT1G	P13640	62 aa		4.28	□□□□□ -1.72
PAX6-238	ENST00000638755	SPTSSB	Q8NFR3	76 aa		4.28	□□□□□ -1.72
PAX6-238	ENST00000638755		H7BZZ5	65 aa		4.26	□□□□□ -1.73
PAX6-238	ENST00000638755	PP632	Q6XCG6	107 aa		4.25	□□□□□ -1.73
PAX6-238	ENST00000638755	COA5	Q86WW8	74 aa		4.25	□□□□□ -1.73
PAX6-238	ENST00000638755	TMEM258	P61165	79 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms