RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 S4R3F8 94 aa10.22□□□□□ -0.77
SCN1B-206ENST00000638536 LCA10Q71F78 164 aa10.21□□□□□ -0.78
SCN1B-206ENST00000638536 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
SCN1B-206ENST00000638536 LINC00208Q96KT6 92 aa10.15□□□□□ -0.78
SCN1B-206ENST00000638536 KLKP1Q107X0 134 aa10.13□□□□□ -0.79
SCN1B-206ENST00000638536 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
SCN1B-206ENST00000638536 TMEM258P61165 79 aa10.11□□□□□ -0.79
SCN1B-206ENST00000638536 CSAG1Q6PB30 78 aa10.09□□□□□ -0.79
SCN1B-206ENST00000638536 MP68P56378 58 aa10.07□□□□□ -0.8
SCN1B-206ENST00000638536 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
SCN1B-206ENST00000638536 C20orf197Q8N268 126 aa10.01□□□□□ -0.81
SCN1B-206ENST00000638536 FCGBPQ9Y6R7 5405 aaPredicted RBP10□□□□□ -0.81
SCN1B-206ENST00000638536 NDUFC1O43677 76 aa9.99□□□□□ -0.81
SCN1B-206ENST00000638536 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
SCN1B-206ENST00000638536 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
SCN1B-206ENST00000638536 H3BPC8 53 aa9.94□□□□□ -0.82
SCN1B-206ENST00000638536 H7BZZ5 65 aa9.91□□□□□ -0.82
SCN1B-206ENST00000638536 A8MUN3 132 aa9.9□□□□□ -0.82
SCN1B-206ENST00000638536 ATP5EP56381 51 aaPredicted RBP9.87□□□□□ -0.83
SCN1B-206ENST00000638536 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
SCN1B-206ENST00000638536 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
SCN1B-206ENST00000638536 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
SCN1B-206ENST00000638536 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
SCN1B-206ENST00000638536 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
SCN1B-206ENST00000638536 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.74□□□□□ -0.85
SCN1B-206ENST00000638536 MT1BP07438 61 aa9.72□□□□□ -0.85
SCN1B-206ENST00000638536 H0YAA0 97 aa9.71□□□□□ -0.86
SCN1B-206ENST00000638536 KRTAP19-8Q3LI54 63 aa9.7□□□□□ -0.86
SCN1B-206ENST00000638536 ADM2Q7Z4H4 148 aa9.67□□□□□ -0.86
SCN1B-206ENST00000638536 MACF1Q9UPN3 7388 aaKnown RBP9.65□□□□□ -0.86
SCN1B-206ENST00000638536 Q5VV11 94 aa9.64□□□□□ -0.87
SCN1B-206ENST00000638536 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
SCN1B-206ENST00000638536 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
SCN1B-206ENST00000638536 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
SCN1B-206ENST00000638536 SYNE2Q8WXH0 6885 aaKnown RBP9.57□□□□□ -0.88
SCN1B-206ENST00000638536 ACYP2P14621 99 aa9.55□□□□□ -0.88
SCN1B-206ENST00000638536 P0C880 135 aa9.54□□□□□ -0.88
SCN1B-206ENST00000638536 KRTAP9-7A8MTY7 169 aa9.53□□□□□ -0.88
SCN1B-206ENST00000638536 SPANXA2-OT1Q8N9U9 137 aa9.51□□□□□ -0.89
SCN1B-206ENST00000638536 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
SCN1B-206ENST00000638536 A6NN06 94 aa9.44□□□□□ -0.9
SCN1B-206ENST00000638536 KRTAP10-5P60370 271 aa9.4□□□□□ -0.9
SCN1B-206ENST00000638536 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
SCN1B-206ENST00000638536 R4GN34 69 aa9.36□□□□□ -0.91
SCN1B-206ENST00000638536 M0QZ58 72 aa9.32□□□□□ -0.92
SCN1B-206ENST00000638536 Q1T7F1 81 aa9.31□□□□□ -0.92
SCN1B-206ENST00000638536 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
SCN1B-206ENST00000638536 V9GYY9 64 aa9.3□□□□□ -0.92
SCN1B-206ENST00000638536 LINC01554Q52M75 96 aa9.2□□□□□ -0.94
SCN1B-206ENST00000638536 COA5Q86WW8 74 aa9.2□□□□□ -0.94
SCN1B-206ENST00000638536 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
SCN1B-206ENST00000638536 PRO0628Q9UI54 55 aa9.17□□□□□ -0.94
SCN1B-206ENST00000638536 MT1XP80297 61 aa9.16□□□□□ -0.94
SCN1B-206ENST00000638536 KRTAP6-3Q3LI67 103 aa9.16□□□□□ -0.94
SCN1B-206ENST00000638536 KMT2DO14686 5537 aa9.08□□□□□ -0.96
SCN1B-206ENST00000638536 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
SCN1B-206ENST00000638536 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
SCN1B-206ENST00000638536 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
SCN1B-206ENST00000638536 PSPHP1O15172 72 aa9.02□□□□□ -0.96
SCN1B-206ENST00000638536 MUC12Q9UKN1 5478 aa9.02□□□□□ -0.97
SCN1B-206ENST00000638536 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
SCN1B-206ENST00000638536 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
SCN1B-206ENST00000638536 NEBP20929 6669 aa8.89□□□□□ -0.99
SCN1B-206ENST00000638536 KRTAP5-9P26371 169 aa8.86□□□□□ -0.99
SCN1B-206ENST00000638536 SEC61GP60059 68 aa8.84□□□□□ -0.99
SCN1B-206ENST00000638536 KRTAP12-2P59991 146 aa8.83□□□□□ -1
SCN1B-206ENST00000638536 MDN1Q9NU22 5596 aa8.8□□□□□ -1
SCN1B-206ENST00000638536 A6NED7 52 aa8.8□□□□□ -1
SCN1B-206ENST00000638536 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
SCN1B-206ENST00000638536 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
SCN1B-206ENST00000638536 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
SCN1B-206ENST00000638536 A0A1B0GU33 70 aa8.75□□□□□ -1.01
SCN1B-206ENST00000638536 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
SCN1B-206ENST00000638536 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
SCN1B-206ENST00000638536 A0A0D9SG42 100 aa8.73□□□□□ -1.01
SCN1B-206ENST00000638536 A0A1B0GU69 56 aa8.69□□□□□ -1.02
SCN1B-206ENST00000638536 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
SCN1B-206ENST00000638536 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
SCN1B-206ENST00000638536 SPRR2FQ96RM1 72 aa8.66□□□□□ -1.02
SCN1B-206ENST00000638536 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
SCN1B-206ENST00000638536 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
SCN1B-206ENST00000638536 A8MU10 97 aa8.59□□□□□ -1.03
SCN1B-206ENST00000638536 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
SCN1B-206ENST00000638536 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
SCN1B-206ENST00000638536 UQCR11O14957 56 aa8.54□□□□□ -1.04
SCN1B-206ENST00000638536 SPRR2EP22531 72 aa8.47□□□□□ -1.05
SCN1B-206ENST00000638536 SPRR2BP35325 72 aa8.47□□□□□ -1.05
SCN1B-206ENST00000638536 SPRR2AP35326 72 aa8.47□□□□□ -1.05
SCN1B-206ENST00000638536 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
SCN1B-206ENST00000638536 LCE1AQ5T7P2 110 aa8.42□□□□□ -1.06
SCN1B-206ENST00000638536 KTN1-AS1Q86SY8 53 aa8.42□□□□□ -1.06
SCN1B-206ENST00000638536 KRTAP20-1Q3LI63 56 aa8.35□□□□□ -1.07
SCN1B-206ENST00000638536 KRTAP2-3P0C7H8 128 aa8.2□□□□□ -1.1
SCN1B-206ENST00000638536 KRTAP19-7Q3SYF9 63 aa8.2□□□□□ -1.1
SCN1B-206ENST00000638536 KRTAP2-4Q9BYR9 128 aa8.2□□□□□ -1.1
SCN1B-206ENST00000638536 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
SCN1B-206ENST00000638536 SPRR2DP22532 72 aa8.17□□□□□ -1.1
SCN1B-206ENST00000638536 MT1EP04732 61 aa8.1□□□□□ -1.11
SCN1B-206ENST00000638536 K7ERS5 55 aa8.05□□□□□ -1.12
SCN1B-206ENST00000638536 KRTAP19-5Q3LI72 72 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms