RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-222ENST00000638134 MYCBP2O75592 4640 aa8.52□□□□□ -1.04
CLCN2-222ENST00000638134 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.05
CLCN2-222ENST00000638134 Q5VSD8 79 aa8.52□□□□□ -1.05
CLCN2-222ENST00000638134 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
CLCN2-222ENST00000638134 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CLCN2-222ENST00000638134 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
CLCN2-222ENST00000638134 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
CLCN2-222ENST00000638134 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
CLCN2-222ENST00000638134 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
CLCN2-222ENST00000638134 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
CLCN2-222ENST00000638134 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
CLCN2-222ENST00000638134 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
CLCN2-222ENST00000638134 KRTAP15-1Q3LI76 137 aa8.41□□□□□ -1.06
CLCN2-222ENST00000638134 NDUFAF8A1L188 74 aa8.39□□□□□ -1.07
CLCN2-222ENST00000638134 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
CLCN2-222ENST00000638134 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
CLCN2-222ENST00000638134 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
CLCN2-222ENST00000638134 TNXBP22105 4242 aa8.36□□□□□ -1.07
CLCN2-222ENST00000638134 KRTAP1-4P0C5Y4 121 aa8.35□□□□□ -1.07
CLCN2-222ENST00000638134 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
CLCN2-222ENST00000638134 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
CLCN2-222ENST00000638134 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.09
CLCN2-222ENST00000638134 A0A0A0MQY5 61 aa8.21□□□□□ -1.1
CLCN2-222ENST00000638134 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
CLCN2-222ENST00000638134 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
CLCN2-222ENST00000638134 MT1HL1P0DM35 61 aa8.15□□□□□ -1.1
CLCN2-222ENST00000638134 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
CLCN2-222ENST00000638134 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
CLCN2-222ENST00000638134 HERC1Q15751 4861 aa8.13□□□□□ -1.11
CLCN2-222ENST00000638134 A0A0D9SG42 100 aa8.11□□□□□ -1.11
CLCN2-222ENST00000638134 S4R3F8 94 aa8.06□□□□□ -1.12
CLCN2-222ENST00000638134 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
CLCN2-222ENST00000638134 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
CLCN2-222ENST00000638134 J3QL48 77 aa8.04□□□□□ -1.12
CLCN2-222ENST00000638134 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
CLCN2-222ENST00000638134 XP32Q5T750 250 aa7.97□□□□□ -1.13
CLCN2-222ENST00000638134 KRTAP12-2P59991 146 aa7.95□□□□□ -1.14
CLCN2-222ENST00000638134 LPAP08519 4548 aa7.95□□□□□ -1.14
CLCN2-222ENST00000638134 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
CLCN2-222ENST00000638134 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
CLCN2-222ENST00000638134 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
CLCN2-222ENST00000638134 LRP2P98164 4655 aa7.83□□□□□ -1.16
CLCN2-222ENST00000638134 M0QZ58 72 aa7.73□□□□□ -1.17
CLCN2-222ENST00000638134 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
CLCN2-222ENST00000638134 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
CLCN2-222ENST00000638134 MUC2Q02817 5179 aa7.61□□□□□ -1.19
CLCN2-222ENST00000638134 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
CLCN2-222ENST00000638134 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
CLCN2-222ENST00000638134 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
CLCN2-222ENST00000638134 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
CLCN2-222ENST00000638134 KRTAP4-1Q9BYQ7 146 aa7.37□□□□□ -1.23
CLCN2-222ENST00000638134 R4GN34 69 aa7.31□□□□□ -1.24
CLCN2-222ENST00000638134 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
CLCN2-222ENST00000638134 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.27
CLCN2-222ENST00000638134 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.27
CLCN2-222ENST00000638134 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
CLCN2-222ENST00000638134 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
CLCN2-222ENST00000638134 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
CLCN2-222ENST00000638134 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
CLCN2-222ENST00000638134 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
CLCN2-222ENST00000638134 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
CLCN2-222ENST00000638134 MT1HP80294 61 aa6.89□□□□□ -1.31
CLCN2-222ENST00000638134 TNP1P09430 55 aa6.89□□□□□ -1.31
CLCN2-222ENST00000638134 INE1O15225 51 aa6.86□□□□□ -1.31
CLCN2-222ENST00000638134 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
CLCN2-222ENST00000638134 M0R2T5 61 aa6.8□□□□□ -1.32
CLCN2-222ENST00000638134 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
CLCN2-222ENST00000638134 MT2AP02795 61 aa6.55□□□□□ -1.36
CLCN2-222ENST00000638134 MT1FP04733 61 aa6.53□□□□□ -1.36
CLCN2-222ENST00000638134 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
CLCN2-222ENST00000638134 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
CLCN2-222ENST00000638134 USH2AO75445 5202 aa6.38□□□□□ -1.39
CLCN2-222ENST00000638134 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
CLCN2-222ENST00000638134 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
CLCN2-222ENST00000638134 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
CLCN2-222ENST00000638134 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
CLCN2-222ENST00000638134 LCE2BO14633 110 aa6.28□□□□□ -1.4
CLCN2-222ENST00000638134 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
CLCN2-222ENST00000638134 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
CLCN2-222ENST00000638134 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
CLCN2-222ENST00000638134 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
CLCN2-222ENST00000638134 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
CLCN2-222ENST00000638134 MT1BP07438 61 aa6.1□□□□□ -1.43
CLCN2-222ENST00000638134 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
CLCN2-222ENST00000638134 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
CLCN2-222ENST00000638134 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CLCN2-222ENST00000638134 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
CLCN2-222ENST00000638134 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CLCN2-222ENST00000638134 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
CLCN2-222ENST00000638134 MT1XP80297 61 aa5.84□□□□□ -1.47
CLCN2-222ENST00000638134 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
CLCN2-222ENST00000638134 KMT2DO14686 5537 aa5.78□□□□□ -1.48
CLCN2-222ENST00000638134 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
CLCN2-222ENST00000638134 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CLCN2-222ENST00000638134 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CLCN2-222ENST00000638134 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CLCN2-222ENST00000638134 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
CLCN2-222ENST00000638134 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
CLCN2-222ENST00000638134 SYNE2Q8WXH0 6885 aaKnown RBP5.66□□□□□ -1.5
CLCN2-222ENST00000638134 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms