RNA–Protein interactions for RNA: ENST00000638112.1

GABRA1-219, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 2,818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-219ENST00000638112 A0A0D9SG42 100 aa5.02□□□□□ -1.61
GABRA1-219ENST00000638112 APOBP04114 4563 aaKnown RBP5□□□□□ -1.61
GABRA1-219ENST00000638112 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
GABRA1-219ENST00000638112 RYR1P21817 5038 aa5□□□□□ -1.61
GABRA1-219ENST00000638112 COX6B2Q6YFQ2 88 aa5□□□□□ -1.61
GABRA1-219ENST00000638112 HSPG2P98160 4391 aa4.98□□□□□ -1.61
GABRA1-219ENST00000638112 SMR3BP02814 79 aaPredicted RBP4.96□□□□□ -1.62
GABRA1-219ENST00000638112 HERC2O95714 4834 aa4.95□□□□□ -1.62
GABRA1-219ENST00000638112 FAT1Q14517 4588 aa4.95□□□□□ -1.62
GABRA1-219ENST00000638112 RPL37P61927 97 aaKnown RBP4.93□□□□□ -1.62
GABRA1-219ENST00000638112 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
GABRA1-219ENST00000638112 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.62
GABRA1-219ENST00000638112 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
GABRA1-219ENST00000638112 Q5VSD8 79 aa4.88□□□□□ -1.63
GABRA1-219ENST00000638112 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
GABRA1-219ENST00000638112 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
GABRA1-219ENST00000638112 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
GABRA1-219ENST00000638112 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
GABRA1-219ENST00000638112 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
GABRA1-219ENST00000638112 MYCBP2O75592 4640 aa4.81□□□□□ -1.64
GABRA1-219ENST00000638112 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
GABRA1-219ENST00000638112 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
GABRA1-219ENST00000638112 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
GABRA1-219ENST00000638112 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
GABRA1-219ENST00000638112 S4R3F8 94 aa4.77□□□□□ -1.65
GABRA1-219ENST00000638112 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
GABRA1-219ENST00000638112 XP32Q5T750 250 aa4.72□□□□□ -1.65
GABRA1-219ENST00000638112 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
GABRA1-219ENST00000638112 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
GABRA1-219ENST00000638112 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
GABRA1-219ENST00000638112 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
GABRA1-219ENST00000638112 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
GABRA1-219ENST00000638112 HERC1Q15751 4861 aa4.66□□□□□ -1.66
GABRA1-219ENST00000638112 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
GABRA1-219ENST00000638112 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
GABRA1-219ENST00000638112 J3QL48 77 aa4.65□□□□□ -1.66
GABRA1-219ENST00000638112 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
GABRA1-219ENST00000638112 TNXBP22105 4242 aa4.63□□□□□ -1.67
GABRA1-219ENST00000638112 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
GABRA1-219ENST00000638112 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
GABRA1-219ENST00000638112 M0QZ58 72 aa4.5□□□□□ -1.69
GABRA1-219ENST00000638112 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
GABRA1-219ENST00000638112 LRP2P98164 4655 aa4.44□□□□□ -1.7
GABRA1-219ENST00000638112 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
GABRA1-219ENST00000638112 LPAP08519 4548 aa4.43□□□□□ -1.7
GABRA1-219ENST00000638112 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.7
GABRA1-219ENST00000638112 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
GABRA1-219ENST00000638112 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
GABRA1-219ENST00000638112 LCE2DQ5TA82 110 aaPredicted RBP4.32□□□□□ -1.72
GABRA1-219ENST00000638112 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
GABRA1-219ENST00000638112 R4GN34 69 aa4.27□□□□□ -1.73
GABRA1-219ENST00000638112 MUC2Q02817 5179 aa4.27□□□□□ -1.73
GABRA1-219ENST00000638112 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
GABRA1-219ENST00000638112 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
GABRA1-219ENST00000638112 KRTAP4-1Q9BYQ7 146 aa4.18□□□□□ -1.74
GABRA1-219ENST00000638112 MUC17Q685J3 4493 aa4.18□□□□□ -1.74
GABRA1-219ENST00000638112 INE1O15225 51 aa4.17□□□□□ -1.74
GABRA1-219ENST00000638112 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
GABRA1-219ENST00000638112 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
GABRA1-219ENST00000638112 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
GABRA1-219ENST00000638112 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
GABRA1-219ENST00000638112 TNP1P09430 55 aa4.01□□□□□ -1.77
GABRA1-219ENST00000638112 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
GABRA1-219ENST00000638112 MT1HP80294 61 aa3.94□□□□□ -1.78
GABRA1-219ENST00000638112 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
GABRA1-219ENST00000638112 M0R2T5 61 aa3.87□□□□□ -1.79
GABRA1-219ENST00000638112 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
GABRA1-219ENST00000638112 KRTAP9-8Q9BYQ0 159 aa3.76□□□□□ -1.81
GABRA1-219ENST00000638112 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
GABRA1-219ENST00000638112 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
GABRA1-219ENST00000638112 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
GABRA1-219ENST00000638112 MT2AP02795 61 aa3.72□□□□□ -1.81
GABRA1-219ENST00000638112 MT1FP04733 61 aa3.71□□□□□ -1.82
GABRA1-219ENST00000638112 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
GABRA1-219ENST00000638112 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
GABRA1-219ENST00000638112 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
GABRA1-219ENST00000638112 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
GABRA1-219ENST00000638112 LCE2BO14633 110 aa3.64□□□□□ -1.83
GABRA1-219ENST00000638112 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
GABRA1-219ENST00000638112 USH2AO75445 5202 aa3.61□□□□□ -1.83
GABRA1-219ENST00000638112 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
GABRA1-219ENST00000638112 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
GABRA1-219ENST00000638112 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
GABRA1-219ENST00000638112 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
GABRA1-219ENST00000638112 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
GABRA1-219ENST00000638112 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
GABRA1-219ENST00000638112 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
GABRA1-219ENST00000638112 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
GABRA1-219ENST00000638112 MT1BP07438 61 aa3.43□□□□□ -1.86
GABRA1-219ENST00000638112 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
GABRA1-219ENST00000638112 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
GABRA1-219ENST00000638112 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
GABRA1-219ENST00000638112 KRTAP2-3P0C7H8 128 aa3.36□□□□□ -1.87
GABRA1-219ENST00000638112 KRTAP2-4Q9BYR9 128 aa3.36□□□□□ -1.87
GABRA1-219ENST00000638112 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
GABRA1-219ENST00000638112 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
GABRA1-219ENST00000638112 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
GABRA1-219ENST00000638112 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
GABRA1-219ENST00000638112 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
GABRA1-219ENST00000638112 MT1XP80297 61 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms