RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
CACNA1A-254ENST00000637952 XP32Q5T750 250 aa4.69□□□□□ -1.66
CACNA1A-254ENST00000637952 A6NED7 52 aa4.69□□□□□ -1.66
CACNA1A-254ENST00000637952 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
CACNA1A-254ENST00000637952 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
CACNA1A-254ENST00000637952 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
CACNA1A-254ENST00000637952 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
CACNA1A-254ENST00000637952 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
CACNA1A-254ENST00000637952 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
CACNA1A-254ENST00000637952 H3BPC8 53 aa4.63□□□□□ -1.67
CACNA1A-254ENST00000637952 M0R2T5 61 aa4.63□□□□□ -1.67
CACNA1A-254ENST00000637952 A8MUU9 505 aa4.63□□□□□ -1.67
CACNA1A-254ENST00000637952 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
CACNA1A-254ENST00000637952 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
CACNA1A-254ENST00000637952 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
CACNA1A-254ENST00000637952 Q5W150 140 aa4.62□□□□□ -1.67
CACNA1A-254ENST00000637952 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
CACNA1A-254ENST00000637952 ABCA13Q86UQ4 5058 aa4.59□□□□□ -1.68
CACNA1A-254ENST00000637952 COA5Q86WW8 74 aa4.57□□□□□ -1.68
CACNA1A-254ENST00000637952 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
CACNA1A-254ENST00000637952 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
CACNA1A-254ENST00000637952 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
CACNA1A-254ENST00000637952 HRES1P13985 223 aa4.54□□□□□ -1.68
CACNA1A-254ENST00000637952 ACYP2P14621 99 aa4.53□□□□□ -1.68
CACNA1A-254ENST00000637952 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
CACNA1A-254ENST00000637952 PCLOQ9Y6V0 5065 aa4.48□□□□□ -1.69
CACNA1A-254ENST00000637952 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
CACNA1A-254ENST00000637952 S4R3F8 94 aa4.44□□□□□ -1.7
CACNA1A-254ENST00000637952 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
CACNA1A-254ENST00000637952 HERC1Q15751 4861 aa4.4□□□□□ -1.71
CACNA1A-254ENST00000637952 LRP2P98164 4655 aa4.38□□□□□ -1.71
CACNA1A-254ENST00000637952 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
CACNA1A-254ENST00000637952 TNXBP22105 4242 aa4.36□□□□□ -1.71
CACNA1A-254ENST00000637952 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
CACNA1A-254ENST00000637952 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
CACNA1A-254ENST00000637952 A0A1B0GU69 56 aa4.31□□□□□ -1.72
CACNA1A-254ENST00000637952 LPAP08519 4548 aa4.3□□□□□ -1.72
CACNA1A-254ENST00000637952 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
CACNA1A-254ENST00000637952 KRTAP4-1Q9BYQ7 146 aa4.29□□□□□ -1.72
CACNA1A-254ENST00000637952 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
CACNA1A-254ENST00000637952 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CACNA1A-254ENST00000637952 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
CACNA1A-254ENST00000637952 H0YAA0 97 aa4.23□□□□□ -1.73
CACNA1A-254ENST00000637952 R4GN34 69 aa4.22□□□□□ -1.73
CACNA1A-254ENST00000637952 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
CACNA1A-254ENST00000637952 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
CACNA1A-254ENST00000637952 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
CACNA1A-254ENST00000637952 UQCR11O14957 56 aa4.2□□□□□ -1.74
CACNA1A-254ENST00000637952 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
CACNA1A-254ENST00000637952 K7ERS5 55 aa4.19□□□□□ -1.74
CACNA1A-254ENST00000637952 A0A0D9SG42 100 aa4.17□□□□□ -1.74
CACNA1A-254ENST00000637952 M0QZ58 72 aa4.17□□□□□ -1.74
CACNA1A-254ENST00000637952 A0A1B0GU33 70 aa4.15□□□□□ -1.74
CACNA1A-254ENST00000637952 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
CACNA1A-254ENST00000637952 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
CACNA1A-254ENST00000637952 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
CACNA1A-254ENST00000637952 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
CACNA1A-254ENST00000637952 MT1HP80294 61 aa4.09□□□□□ -1.75
CACNA1A-254ENST00000637952 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
CACNA1A-254ENST00000637952 MUC2Q02817 5179 aa4.07□□□□□ -1.76
CACNA1A-254ENST00000637952 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
CACNA1A-254ENST00000637952 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
CACNA1A-254ENST00000637952 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
CACNA1A-254ENST00000637952 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
CACNA1A-254ENST00000637952 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
CACNA1A-254ENST00000637952 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
CACNA1A-254ENST00000637952 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
CACNA1A-254ENST00000637952 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.78
CACNA1A-254ENST00000637952 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
CACNA1A-254ENST00000637952 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
CACNA1A-254ENST00000637952 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
CACNA1A-254ENST00000637952 MT2AP02795 61 aa3.92□□□□□ -1.78
CACNA1A-254ENST00000637952 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
CACNA1A-254ENST00000637952 MT1FP04733 61 aa3.88□□□□□ -1.79
CACNA1A-254ENST00000637952 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
CACNA1A-254ENST00000637952 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
CACNA1A-254ENST00000637952 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
CACNA1A-254ENST00000637952 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
CACNA1A-254ENST00000637952 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
CACNA1A-254ENST00000637952 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
CACNA1A-254ENST00000637952 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
CACNA1A-254ENST00000637952 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CACNA1A-254ENST00000637952 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
CACNA1A-254ENST00000637952 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
CACNA1A-254ENST00000637952 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
CACNA1A-254ENST00000637952 TNP1P09430 55 aa3.71□□□□□ -1.82
CACNA1A-254ENST00000637952 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
CACNA1A-254ENST00000637952 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
CACNA1A-254ENST00000637952 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
CACNA1A-254ENST00000637952 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
CACNA1A-254ENST00000637952 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
CACNA1A-254ENST00000637952 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
CACNA1A-254ENST00000637952 MT1BP07438 61 aa3.58□□□□□ -1.84
CACNA1A-254ENST00000637952 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
CACNA1A-254ENST00000637952 INE1O15225 51 aa3.5□□□□□ -1.85
CACNA1A-254ENST00000637952 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
CACNA1A-254ENST00000637952 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
CACNA1A-254ENST00000637952 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
CACNA1A-254ENST00000637952 USH2AO75445 5202 aa3.47□□□□□ -1.85
CACNA1A-254ENST00000637952 MT1XP80297 61 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms