RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
CHRNA7-231ENST00000637786 SPANXA2-OT1Q8N9U9 137 aa10.61□□□□□ -0.71
CHRNA7-231ENST00000637786 NDUFC1O43677 76 aa10.59□□□□□ -0.71
CHRNA7-231ENST00000637786 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
CHRNA7-231ENST00000637786 KRTAP9-2Q9BYQ4 174 aa10.57□□□□□ -0.72
CHRNA7-231ENST00000637786 MT1FP04733 61 aa10.55□□□□□ -0.72
CHRNA7-231ENST00000637786 ACYP2P14621 99 aa10.55□□□□□ -0.72
CHRNA7-231ENST00000637786 KRTAP10-10P60014 251 aa10.52□□□□□ -0.73
CHRNA7-231ENST00000637786 H7BZZ5 65 aa10.46□□□□□ -0.73
CHRNA7-231ENST00000637786 CYSTM1Q9H1C7 97 aa10.46□□□□□ -0.73
CHRNA7-231ENST00000637786 CCDC179H3BU77 68 aa10.41□□□□□ -0.74
CHRNA7-231ENST00000637786 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
CHRNA7-231ENST00000637786 H0YAA0 97 aa10.38□□□□□ -0.75
CHRNA7-231ENST00000637786 KRTAP9-6A0A140TA67 174 aa10.36□□□□□ -0.75
CHRNA7-231ENST00000637786 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
CHRNA7-231ENST00000637786 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
CHRNA7-231ENST00000637786 COA5Q86WW8 74 aa10.24□□□□□ -0.77
CHRNA7-231ENST00000637786 ADM2Q7Z4H4 148 aa10.22□□□□□ -0.77
CHRNA7-231ENST00000637786 LCE2BO14633 110 aa10.19□□□□□ -0.78
CHRNA7-231ENST00000637786 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
CHRNA7-231ENST00000637786 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
CHRNA7-231ENST00000637786 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
CHRNA7-231ENST00000637786 SPRR2GQ9BYE4 73 aa10.12□□□□□ -0.79
CHRNA7-231ENST00000637786 TMEM258P61165 79 aa10.11□□□□□ -0.79
CHRNA7-231ENST00000637786 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
CHRNA7-231ENST00000637786 USH2AO75445 5202 aa10.09□□□□□ -0.79
CHRNA7-231ENST00000637786 P0C880 135 aa10.05□□□□□ -0.8
CHRNA7-231ENST00000637786 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
CHRNA7-231ENST00000637786 CRCT1Q9UGL9 99 aa10.02□□□□□ -0.81
CHRNA7-231ENST00000637786 KRTAP19-8Q3LI54 63 aa9.96□□□□□ -0.82
CHRNA7-231ENST00000637786 R4GN34 69 aa9.93□□□□□ -0.82
CHRNA7-231ENST00000637786 PCP4P48539 62 aa9.89□□□□□ -0.83
CHRNA7-231ENST00000637786 Q5VV11 94 aa9.89□□□□□ -0.83
CHRNA7-231ENST00000637786 M0QZ58 72 aa9.86□□□□□ -0.83
CHRNA7-231ENST00000637786 SEC61GP60059 68 aa9.86□□□□□ -0.83
CHRNA7-231ENST00000637786 SSPOA2VEC9 5147 aa9.85□□□□□ -0.83
CHRNA7-231ENST00000637786 MT1BP07438 61 aa9.85□□□□□ -0.83
CHRNA7-231ENST00000637786 SERP1Q9Y6X1 66 aa9.82□□□□□ -0.84
CHRNA7-231ENST00000637786 KRTAP19-6Q3LI70 58 aa9.77□□□□□ -0.85
CHRNA7-231ENST00000637786 A0A1B0GU69 56 aa9.71□□□□□ -0.86
CHRNA7-231ENST00000637786 LINC01554Q52M75 96 aa9.65□□□□□ -0.86
CHRNA7-231ENST00000637786 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
CHRNA7-231ENST00000637786 A0A1B0GU33 70 aa9.63□□□□□ -0.87
CHRNA7-231ENST00000637786 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
CHRNA7-231ENST00000637786 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
CHRNA7-231ENST00000637786 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
CHRNA7-231ENST00000637786 FCGBPQ9Y6R7 5405 aaPredicted RBP9.59□□□□□ -0.87
CHRNA7-231ENST00000637786 A6NN06 94 aa9.56□□□□□ -0.88
CHRNA7-231ENST00000637786 KRTAP10-5P60370 271 aa9.52□□□□□ -0.89
CHRNA7-231ENST00000637786 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
CHRNA7-231ENST00000637786 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
CHRNA7-231ENST00000637786 V9GYY9 64 aa9.46□□□□□ -0.9
CHRNA7-231ENST00000637786 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
CHRNA7-231ENST00000637786 Q1T7F1 81 aa9.41□□□□□ -0.9
CHRNA7-231ENST00000637786 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
CHRNA7-231ENST00000637786 MT1XP80297 61 aa9.38□□□□□ -0.91
CHRNA7-231ENST00000637786 A0A0D9SG42 100 aa9.36□□□□□ -0.91
CHRNA7-231ENST00000637786 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
CHRNA7-231ENST00000637786 UQCR11O14957 56 aa9.3□□□□□ -0.92
CHRNA7-231ENST00000637786 KRTAP9-7A8MTY7 169 aa9.26□□□□□ -0.93
CHRNA7-231ENST00000637786 PSPHP1O15172 72 aa9.24□□□□□ -0.93
CHRNA7-231ENST00000637786 KRTAP12-1P59990 96 aa9.24□□□□□ -0.93
CHRNA7-231ENST00000637786 A8MU10 97 aa9.23□□□□□ -0.93
CHRNA7-231ENST00000637786 SPINT4Q6UDR6 99 aa9.21□□□□□ -0.94
CHRNA7-231ENST00000637786 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.94
CHRNA7-231ENST00000637786 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
CHRNA7-231ENST00000637786 MACF1Q9UPN3 7388 aaKnown RBP9.15□□□□□ -0.94
CHRNA7-231ENST00000637786 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
CHRNA7-231ENST00000637786 A6NED7 52 aa8.99□□□□□ -0.97
CHRNA7-231ENST00000637786 KRTAP10-7P60409 375 aaPredicted RBP8.94□□□□□ -0.98
CHRNA7-231ENST00000637786 KRTAP10-12P60413 245 aa8.93□□□□□ -0.98
CHRNA7-231ENST00000637786 SYNE2Q8WXH0 6885 aaKnown RBP8.93□□□□□ -0.98
CHRNA7-231ENST00000637786 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
CHRNA7-231ENST00000637786 K7ERS5 55 aa8.86□□□□□ -0.99
CHRNA7-231ENST00000637786 KMT2DO14686 5537 aa8.78□□□□□ -1
CHRNA7-231ENST00000637786 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
CHRNA7-231ENST00000637786 KRTAP5-9P26371 169 aa8.76□□□□□ -1.01
CHRNA7-231ENST00000637786 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
CHRNA7-231ENST00000637786 KRTAP8-1Q8IUC2 63 aa8.75□□□□□ -1.01
CHRNA7-231ENST00000637786 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
CHRNA7-231ENST00000637786 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
CHRNA7-231ENST00000637786 TNP1P09430 55 aa8.67□□□□□ -1.02
CHRNA7-231ENST00000637786 SPRR2FQ96RM1 72 aa8.58□□□□□ -1.04
CHRNA7-231ENST00000637786 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
CHRNA7-231ENST00000637786 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
CHRNA7-231ENST00000637786 LCE3AQ5TA76 89 aa8.39□□□□□ -1.07
CHRNA7-231ENST00000637786 NEBP20929 6669 aa8.38□□□□□ -1.07
CHRNA7-231ENST00000637786 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
CHRNA7-231ENST00000637786 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
CHRNA7-231ENST00000637786 ROMO1P60602 79 aa8.36□□□□□ -1.07
CHRNA7-231ENST00000637786 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
CHRNA7-231ENST00000637786 SPRR2EP22531 72 aa8.32□□□□□ -1.08
CHRNA7-231ENST00000637786 SPRR2BP35325 72 aa8.32□□□□□ -1.08
CHRNA7-231ENST00000637786 SPRR2AP35326 72 aa8.32□□□□□ -1.08
CHRNA7-231ENST00000637786 LCE1AQ5T7P2 110 aa8.31□□□□□ -1.08
CHRNA7-231ENST00000637786 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
CHRNA7-231ENST00000637786 MT1EP04732 61 aa8.27□□□□□ -1.09
CHRNA7-231ENST00000637786 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
CHRNA7-231ENST00000637786 KRTAP12-3P60328 96 aa8.1□□□□□ -1.11
CHRNA7-231ENST00000637786 KRTAP19-3Q7Z4W3 81 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms