RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 CHKB-CPT1BH3BT56 60 aa2.41□□□□□ -2.02
SCN8A-213ENST00000637540 LCA10Q71F78 164 aa2.41□□□□□ -2.02
SCN8A-213ENST00000637540 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.02
SCN8A-213ENST00000637540 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
SCN8A-213ENST00000637540 J3QL48 77 aa2.39□□□□□ -2.03
SCN8A-213ENST00000637540 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
SCN8A-213ENST00000637540 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
SCN8A-213ENST00000637540 KRTAP3-2Q9BYR7 98 aa2.38□□□□□ -2.03
SCN8A-213ENST00000637540 PRO0628Q9UI54 55 aa2.38□□□□□ -2.03
SCN8A-213ENST00000637540 KRTAP10-6P60371 365 aaPredicted RBP2.37□□□□□ -2.03
SCN8A-213ENST00000637540 A0A1B0GU69 56 aa2.36□□□□□ -2.03
SCN8A-213ENST00000637540 SEC61BP60468 96 aaKnown RBP2.36□□□□□ -2.03
SCN8A-213ENST00000637540 SPATA8Q6RVD6 105 aa2.36□□□□□ -2.03
SCN8A-213ENST00000637540 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
SCN8A-213ENST00000637540 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
SCN8A-213ENST00000637540 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
SCN8A-213ENST00000637540 A6NED7 52 aa2.34□□□□□ -2.03
SCN8A-213ENST00000637540 S4R3F8 94 aa2.34□□□□□ -2.03
SCN8A-213ENST00000637540 H0YAA0 97 aa2.32□□□□□ -2.04
SCN8A-213ENST00000637540 LCE2CQ5TA81 110 aa2.32□□□□□ -2.04
SCN8A-213ENST00000637540 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
SCN8A-213ENST00000637540 UQCR11O14957 56 aa2.31□□□□□ -2.04
SCN8A-213ENST00000637540 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
SCN8A-213ENST00000637540 A0A1B0GU33 70 aa2.3□□□□□ -2.04
SCN8A-213ENST00000637540 A6NN06 94 aa2.3□□□□□ -2.04
SCN8A-213ENST00000637540 P0C880 135 aa2.3□□□□□ -2.04
SCN8A-213ENST00000637540 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
SCN8A-213ENST00000637540 MUC2Q02817 5179 aa2.29□□□□□ -2.04
SCN8A-213ENST00000637540 SEC61GP60059 68 aa2.29□□□□□ -2.04
SCN8A-213ENST00000637540 CSAG1Q6PB30 78 aa2.29□□□□□ -2.04
SCN8A-213ENST00000637540 ADM2Q7Z4H4 148 aa2.26□□□□□ -2.05
SCN8A-213ENST00000637540 LORP23490 312 aaPredicted RBP2.25□□□□□ -2.05
SCN8A-213ENST00000637540 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
SCN8A-213ENST00000637540 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
SCN8A-213ENST00000637540 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
SCN8A-213ENST00000637540 M0QZ58 72 aa2.21□□□□□ -2.06
SCN8A-213ENST00000637540 MT1HP80294 61 aa2.21□□□□□ -2.06
SCN8A-213ENST00000637540 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
SCN8A-213ENST00000637540 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
SCN8A-213ENST00000637540 KRTAP12-2P59991 146 aa2.19□□□□□ -2.06
SCN8A-213ENST00000637540 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
SCN8A-213ENST00000637540 KRTAP9-8Q9BYQ0 159 aa2.18□□□□□ -2.06
SCN8A-213ENST00000637540 A0A0D9SG42 100 aa2.17□□□□□ -2.06
SCN8A-213ENST00000637540 MT2AP02795 61 aa2.15□□□□□ -2.07
SCN8A-213ENST00000637540 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
SCN8A-213ENST00000637540 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
SCN8A-213ENST00000637540 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
SCN8A-213ENST00000637540 R4GN34 69 aa2.14□□□□□ -2.07
SCN8A-213ENST00000637540 MT1FP04733 61 aa2.13□□□□□ -2.07
SCN8A-213ENST00000637540 PRAC1Q96KF2 57 aa2.13□□□□□ -2.07
SCN8A-213ENST00000637540 LCE2AQ5TA79 106 aaPredicted RBP2.12□□□□□ -2.07
SCN8A-213ENST00000637540 K7ERS5 55 aa2.11□□□□□ -2.07
SCN8A-213ENST00000637540 ROMO1P60602 79 aa2.11□□□□□ -2.07
SCN8A-213ENST00000637540 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
SCN8A-213ENST00000637540 SPINT4Q6UDR6 99 aa2.09□□□□□ -2.07
SCN8A-213ENST00000637540 KRTAP9-3Q9BYQ3 159 aa2.09□□□□□ -2.07
SCN8A-213ENST00000637540 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
SCN8A-213ENST00000637540 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
SCN8A-213ENST00000637540 M0R2T5 61 aa2.07□□□□□ -2.08
SCN8A-213ENST00000637540 MT1BP07438 61 aa2.07□□□□□ -2.08
SCN8A-213ENST00000637540 KRTAP25-1Q3LHN0 102 aa2.07□□□□□ -2.08
SCN8A-213ENST00000637540 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
SCN8A-213ENST00000637540 LCE2BO14633 110 aa2.02□□□□□ -2.09
SCN8A-213ENST00000637540 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
SCN8A-213ENST00000637540 MT1XP80297 61 aa1.99□□□□□ -2.09
SCN8A-213ENST00000637540 CAMK2N1Q7Z7J9 78 aa1.98□□□□□ -2.09
SCN8A-213ENST00000637540 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
SCN8A-213ENST00000637540 KRTAP23-1A1A580 65 aa1.97□□□□□ -2.09
SCN8A-213ENST00000637540 TNP1P09430 55 aa1.94□□□□□ -2.1
SCN8A-213ENST00000637540 USH2AO75445 5202 aa1.93□□□□□ -2.1
SCN8A-213ENST00000637540 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
SCN8A-213ENST00000637540 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
SCN8A-213ENST00000637540 KRTAP10-12P60413 245 aa1.9□□□□□ -2.11
SCN8A-213ENST00000637540 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
SCN8A-213ENST00000637540 SSPOA2VEC9 5147 aa1.89□□□□□ -2.11
SCN8A-213ENST00000637540 KRTAP15-1Q3LI76 137 aa1.89□□□□□ -2.11
SCN8A-213ENST00000637540 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
SCN8A-213ENST00000637540 KRTAP19-6Q3LI70 58 aa1.87□□□□□ -2.11
SCN8A-213ENST00000637540 LCE2DQ5TA82 110 aaPredicted RBP1.87□□□□□ -2.11
SCN8A-213ENST00000637540 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
SCN8A-213ENST00000637540 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
SCN8A-213ENST00000637540 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
SCN8A-213ENST00000637540 KRTAP4-8Q9BYQ9 185 aa1.83□□□□□ -2.12
SCN8A-213ENST00000637540 KRTAP12-3P60328 96 aa1.81□□□□□ -2.12
SCN8A-213ENST00000637540 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
SCN8A-213ENST00000637540 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
SCN8A-213ENST00000637540 KMT2DO14686 5537 aa1.78□□□□□ -2.12
SCN8A-213ENST00000637540 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
SCN8A-213ENST00000637540 MT1EP04732 61 aa1.74□□□□□ -2.13
SCN8A-213ENST00000637540 KRTAP9-2Q9BYQ4 174 aa1.73□□□□□ -2.13
SCN8A-213ENST00000637540 MT1LQ93083 61 aa1.71□□□□□ -2.14
SCN8A-213ENST00000637540 KRTAP19-4Q3LI73 84 aa1.7□□□□□ -2.14
SCN8A-213ENST00000637540 LCE3CQ5T5A8 94 aa1.7□□□□□ -2.14
SCN8A-213ENST00000637540 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
SCN8A-213ENST00000637540 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
SCN8A-213ENST00000637540 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
SCN8A-213ENST00000637540 KRTAP4-7Q9BYR0 210 aa1.67□□□□□ -2.14
SCN8A-213ENST00000637540 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
SCN8A-213ENST00000637540 KRTAP5-9P26371 169 aa1.64□□□□□ -2.15
SCN8A-213ENST00000637540 LCE5AQ5TCM9 118 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms