RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
CLCN2-220ENST00000637538 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
CLCN2-220ENST00000637538 A8MUN3 132 aa8.48□□□□□ -1.05
CLCN2-220ENST00000637538 KRTAP9-6A0A140TA67 174 aa8.44□□□□□ -1.06
CLCN2-220ENST00000637538 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
CLCN2-220ENST00000637538 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
CLCN2-220ENST00000637538 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
CLCN2-220ENST00000637538 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
CLCN2-220ENST00000637538 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
CLCN2-220ENST00000637538 PSPHP1O15172 72 aa8.35□□□□□ -1.07
CLCN2-220ENST00000637538 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.08
CLCN2-220ENST00000637538 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
CLCN2-220ENST00000637538 Q5VV11 94 aa8.31□□□□□ -1.08
CLCN2-220ENST00000637538 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
CLCN2-220ENST00000637538 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
CLCN2-220ENST00000637538 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
CLCN2-220ENST00000637538 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
CLCN2-220ENST00000637538 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
CLCN2-220ENST00000637538 S4R3F8 94 aa8.23□□□□□ -1.09
CLCN2-220ENST00000637538 LCA10Q71F78 164 aa8.22□□□□□ -1.09
CLCN2-220ENST00000637538 A0A1B0GU69 56 aa8.17□□□□□ -1.1
CLCN2-220ENST00000637538 A6NED7 52 aa8.16□□□□□ -1.1
CLCN2-220ENST00000637538 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
CLCN2-220ENST00000637538 SEC61GP60059 68 aa8.08□□□□□ -1.12
CLCN2-220ENST00000637538 MT1HP80294 61 aa8.05□□□□□ -1.12
CLCN2-220ENST00000637538 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
CLCN2-220ENST00000637538 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
CLCN2-220ENST00000637538 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
CLCN2-220ENST00000637538 FSIP2Q5CZC0 6907 aa7.99□□□□□ -1.13
CLCN2-220ENST00000637538 UQCR11O14957 56 aa7.98□□□□□ -1.13
CLCN2-220ENST00000637538 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
CLCN2-220ENST00000637538 A8MU10 97 aa7.94□□□□□ -1.14
CLCN2-220ENST00000637538 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
CLCN2-220ENST00000637538 H0YAA0 97 aa7.93□□□□□ -1.14
CLCN2-220ENST00000637538 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
CLCN2-220ENST00000637538 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.14
CLCN2-220ENST00000637538 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
CLCN2-220ENST00000637538 A0A1B0GU33 70 aa7.87□□□□□ -1.15
CLCN2-220ENST00000637538 M0R2T5 61 aa7.87□□□□□ -1.15
CLCN2-220ENST00000637538 KTN1-AS1Q86SY8 53 aa7.86□□□□□ -1.15
CLCN2-220ENST00000637538 A6NN06 94 aa7.85□□□□□ -1.15
CLCN2-220ENST00000637538 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
CLCN2-220ENST00000637538 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
CLCN2-220ENST00000637538 P0C880 135 aa7.82□□□□□ -1.16
CLCN2-220ENST00000637538 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
CLCN2-220ENST00000637538 MT2AP02795 61 aa7.72□□□□□ -1.17
CLCN2-220ENST00000637538 MT1FP04733 61 aa7.66□□□□□ -1.18
CLCN2-220ENST00000637538 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
CLCN2-220ENST00000637538 M0QZ58 72 aa7.59□□□□□ -1.19
CLCN2-220ENST00000637538 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
CLCN2-220ENST00000637538 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
CLCN2-220ENST00000637538 K7ERS5 55 aa7.57□□□□□ -1.2
CLCN2-220ENST00000637538 R4GN34 69 aa7.55□□□□□ -1.2
CLCN2-220ENST00000637538 KRTAP9-7A8MTY7 169 aa7.53□□□□□ -1.2
CLCN2-220ENST00000637538 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
CLCN2-220ENST00000637538 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
CLCN2-220ENST00000637538 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
CLCN2-220ENST00000637538 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
CLCN2-220ENST00000637538 A0A0D9SG42 100 aa7.46□□□□□ -1.22
CLCN2-220ENST00000637538 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
CLCN2-220ENST00000637538 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
CLCN2-220ENST00000637538 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
CLCN2-220ENST00000637538 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
CLCN2-220ENST00000637538 USH2AO75445 5202 aa7.34□□□□□ -1.23
CLCN2-220ENST00000637538 LCE2BO14633 110 aa7.31□□□□□ -1.24
CLCN2-220ENST00000637538 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
CLCN2-220ENST00000637538 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
CLCN2-220ENST00000637538 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
CLCN2-220ENST00000637538 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
CLCN2-220ENST00000637538 MT1BP07438 61 aa7.24□□□□□ -1.25
CLCN2-220ENST00000637538 ROMO1P60602 79 aa7.24□□□□□ -1.25
CLCN2-220ENST00000637538 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
CLCN2-220ENST00000637538 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
CLCN2-220ENST00000637538 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
CLCN2-220ENST00000637538 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
CLCN2-220ENST00000637538 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
CLCN2-220ENST00000637538 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
CLCN2-220ENST00000637538 MT1XP80297 61 aa6.97□□□□□ -1.29
CLCN2-220ENST00000637538 KRTAP10-5P60370 271 aa6.96□□□□□ -1.29
CLCN2-220ENST00000637538 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
CLCN2-220ENST00000637538 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
CLCN2-220ENST00000637538 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
CLCN2-220ENST00000637538 TNP1P09430 55 aa6.71□□□□□ -1.34
CLCN2-220ENST00000637538 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
CLCN2-220ENST00000637538 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
CLCN2-220ENST00000637538 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CLCN2-220ENST00000637538 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
CLCN2-220ENST00000637538 NEBP20929 6669 aa6.62□□□□□ -1.35
CLCN2-220ENST00000637538 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
CLCN2-220ENST00000637538 KRTAP20-1Q3LI63 56 aa6.55□□□□□ -1.36
CLCN2-220ENST00000637538 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
CLCN2-220ENST00000637538 KMT2DO14686 5537 aa6.45□□□□□ -1.38
CLCN2-220ENST00000637538 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
CLCN2-220ENST00000637538 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
CLCN2-220ENST00000637538 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CLCN2-220ENST00000637538 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
CLCN2-220ENST00000637538 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
CLCN2-220ENST00000637538 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
CLCN2-220ENST00000637538 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
CLCN2-220ENST00000637538 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms