RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
CLN5-219ENST00000637537 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
CLN5-219ENST00000637537 A8MUU9 505 aa10.12□□□□□ -0.79
CLN5-219ENST00000637537 H3BS24 57 aa10.11□□□□□ -0.79
CLN5-219ENST00000637537 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
CLN5-219ENST00000637537 KRTAP4-5Q9BYR2 181 aa10.06□□□□□ -0.8
CLN5-219ENST00000637537 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
CLN5-219ENST00000637537 XP32Q5T750 250 aa9.9□□□□□ -0.83
CLN5-219ENST00000637537 H0YAA0 97 aa9.88□□□□□ -0.83
CLN5-219ENST00000637537 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
CLN5-219ENST00000637537 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
CLN5-219ENST00000637537 LPAP08519 4548 aa9.82□□□□□ -0.84
CLN5-219ENST00000637537 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
CLN5-219ENST00000637537 LRP2P98164 4655 aa9.81□□□□□ -0.84
CLN5-219ENST00000637537 HERC2O95714 4834 aa9.78□□□□□ -0.84
CLN5-219ENST00000637537 ROMO1P60602 79 aa9.76□□□□□ -0.85
CLN5-219ENST00000637537 A0A1B0GU33 70 aa9.72□□□□□ -0.85
CLN5-219ENST00000637537 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
CLN5-219ENST00000637537 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
CLN5-219ENST00000637537 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
CLN5-219ENST00000637537 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
CLN5-219ENST00000637537 J3QL48 77 aa9.63□□□□□ -0.87
CLN5-219ENST00000637537 K7ERS5 55 aa9.51□□□□□ -0.89
CLN5-219ENST00000637537 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
CLN5-219ENST00000637537 PCLOQ9Y6V0 5065 aa9.49□□□□□ -0.89
CLN5-219ENST00000637537 P0C880 135 aa9.49□□□□□ -0.89
CLN5-219ENST00000637537 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
CLN5-219ENST00000637537 HERC1Q15751 4861 aa9.4□□□□□ -0.9
CLN5-219ENST00000637537 S4R3F8 94 aa9.37□□□□□ -0.91
CLN5-219ENST00000637537 SEC61BP60468 96 aaKnown RBP9.32□□□□□ -0.92
CLN5-219ENST00000637537 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
CLN5-219ENST00000637537 MUC2Q02817 5179 aa9.31□□□□□ -0.92
CLN5-219ENST00000637537 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
CLN5-219ENST00000637537 KRTAP10-6P60371 365 aaPredicted RBP9.26□□□□□ -0.93
CLN5-219ENST00000637537 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
CLN5-219ENST00000637537 SPINT4Q6UDR6 99 aa9.22□□□□□ -0.93
CLN5-219ENST00000637537 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
CLN5-219ENST00000637537 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
CLN5-219ENST00000637537 A0A0D9SG42 100 aa9.15□□□□□ -0.94
CLN5-219ENST00000637537 KRTAP15-1Q3LI76 137 aa9.14□□□□□ -0.95
CLN5-219ENST00000637537 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
CLN5-219ENST00000637537 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
CLN5-219ENST00000637537 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.97
CLN5-219ENST00000637537 KRTAP12-2P59991 146 aa8.96□□□□□ -0.97
CLN5-219ENST00000637537 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
CLN5-219ENST00000637537 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
CLN5-219ENST00000637537 KRTAP12-1P59990 96 aa8.88□□□□□ -0.99
CLN5-219ENST00000637537 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
CLN5-219ENST00000637537 FLGP20930 4061 aaPredicted RBP8.84□□□□□ -0.99
CLN5-219ENST00000637537 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
CLN5-219ENST00000637537 M0QZ58 72 aa8.72□□□□□ -1.01
CLN5-219ENST00000637537 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
CLN5-219ENST00000637537 R4GN34 69 aa8.69□□□□□ -1.02
CLN5-219ENST00000637537 M0R2T5 61 aa8.49□□□□□ -1.05
CLN5-219ENST00000637537 MT1HP80294 61 aa8.49□□□□□ -1.05
CLN5-219ENST00000637537 PLAC4Q8WY50 150 aa8.46□□□□□ -1.06
CLN5-219ENST00000637537 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
CLN5-219ENST00000637537 LUZP6Q538Z0 58 aa8.32□□□□□ -1.08
CLN5-219ENST00000637537 MT2AP02795 61 aa8.23□□□□□ -1.09
CLN5-219ENST00000637537 MT1FP04733 61 aa8.23□□□□□ -1.09
CLN5-219ENST00000637537 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
CLN5-219ENST00000637537 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
CLN5-219ENST00000637537 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
CLN5-219ENST00000637537 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CLN5-219ENST00000637537 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
CLN5-219ENST00000637537 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
CLN5-219ENST00000637537 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
CLN5-219ENST00000637537 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
CLN5-219ENST00000637537 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
CLN5-219ENST00000637537 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
CLN5-219ENST00000637537 MT1BP07438 61 aa7.83□□□□□ -1.16
CLN5-219ENST00000637537 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
CLN5-219ENST00000637537 TNP1P09430 55 aa7.78□□□□□ -1.16
CLN5-219ENST00000637537 USH2AO75445 5202 aa7.74□□□□□ -1.17
CLN5-219ENST00000637537 LCE2BO14633 110 aa7.68□□□□□ -1.18
CLN5-219ENST00000637537 MT1XP80297 61 aa7.67□□□□□ -1.18
CLN5-219ENST00000637537 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
CLN5-219ENST00000637537 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
CLN5-219ENST00000637537 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
CLN5-219ENST00000637537 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
CLN5-219ENST00000637537 FSIP2Q5CZC0 6907 aa7.4□□□□□ -1.22
CLN5-219ENST00000637537 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
CLN5-219ENST00000637537 KMT2DO14686 5537 aa7.34□□□□□ -1.23
CLN5-219ENST00000637537 INE1O15225 51 aa7.29□□□□□ -1.24
CLN5-219ENST00000637537 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
CLN5-219ENST00000637537 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
CLN5-219ENST00000637537 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
CLN5-219ENST00000637537 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
CLN5-219ENST00000637537 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
CLN5-219ENST00000637537 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
CLN5-219ENST00000637537 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
CLN5-219ENST00000637537 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.31
CLN5-219ENST00000637537 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
CLN5-219ENST00000637537 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.31
CLN5-219ENST00000637537 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
CLN5-219ENST00000637537 MT1EP04732 61 aa6.66□□□□□ -1.34
CLN5-219ENST00000637537 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
CLN5-219ENST00000637537 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
CLN5-219ENST00000637537 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
CLN5-219ENST00000637537 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms