RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
CHRNA7-227ENST00000637350 A6NN06 94 aa8.98□□□□□ -0.97
CHRNA7-227ENST00000637350 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
CHRNA7-227ENST00000637350 XP32Q5T750 250 aa8.94□□□□□ -0.98
CHRNA7-227ENST00000637350 J3QL48 77 aa8.93□□□□□ -0.98
CHRNA7-227ENST00000637350 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.98
CHRNA7-227ENST00000637350 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
CHRNA7-227ENST00000637350 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
CHRNA7-227ENST00000637350 UQCR11O14957 56 aa8.84□□□□□ -0.99
CHRNA7-227ENST00000637350 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
CHRNA7-227ENST00000637350 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
CHRNA7-227ENST00000637350 LPAP08519 4548 aa8.77□□□□□ -1.01
CHRNA7-227ENST00000637350 LRP2P98164 4655 aa8.74□□□□□ -1.01
CHRNA7-227ENST00000637350 HERC1Q15751 4861 aa8.7□□□□□ -1.02
CHRNA7-227ENST00000637350 H0YAA0 97 aa8.69□□□□□ -1.02
CHRNA7-227ENST00000637350 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
CHRNA7-227ENST00000637350 A0A1B0GU33 70 aa8.61□□□□□ -1.03
CHRNA7-227ENST00000637350 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
CHRNA7-227ENST00000637350 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
CHRNA7-227ENST00000637350 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
CHRNA7-227ENST00000637350 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
CHRNA7-227ENST00000637350 S4R3F8 94 aa8.54□□□□□ -1.04
CHRNA7-227ENST00000637350 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
CHRNA7-227ENST00000637350 HMCN2Q8NDA2 5059 aa8.48□□□□□ -1.05
CHRNA7-227ENST00000637350 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
CHRNA7-227ENST00000637350 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
CHRNA7-227ENST00000637350 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
CHRNA7-227ENST00000637350 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
CHRNA7-227ENST00000637350 P0C880 135 aa8.38□□□□□ -1.07
CHRNA7-227ENST00000637350 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
CHRNA7-227ENST00000637350 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CHRNA7-227ENST00000637350 A0A0D9SG42 100 aa8.27□□□□□ -1.08
CHRNA7-227ENST00000637350 MUC2Q02817 5179 aa8.24□□□□□ -1.09
CHRNA7-227ENST00000637350 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
CHRNA7-227ENST00000637350 K7ERS5 55 aa8.19□□□□□ -1.1
CHRNA7-227ENST00000637350 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
CHRNA7-227ENST00000637350 H3BS24 57 aa8.14□□□□□ -1.11
CHRNA7-227ENST00000637350 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
CHRNA7-227ENST00000637350 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
CHRNA7-227ENST00000637350 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
CHRNA7-227ENST00000637350 ROMO1P60602 79 aa8.06□□□□□ -1.12
CHRNA7-227ENST00000637350 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CHRNA7-227ENST00000637350 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
CHRNA7-227ENST00000637350 M0QZ58 72 aa8□□□□□ -1.13
CHRNA7-227ENST00000637350 FLGP20930 4061 aaPredicted RBP7.99□□□□□ -1.13
CHRNA7-227ENST00000637350 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
CHRNA7-227ENST00000637350 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
CHRNA7-227ENST00000637350 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
CHRNA7-227ENST00000637350 R4GN34 69 aa7.88□□□□□ -1.15
CHRNA7-227ENST00000637350 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
CHRNA7-227ENST00000637350 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
CHRNA7-227ENST00000637350 MT1HP80294 61 aa7.78□□□□□ -1.16
CHRNA7-227ENST00000637350 M0R2T5 61 aa7.74□□□□□ -1.17
CHRNA7-227ENST00000637350 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.2
CHRNA7-227ENST00000637350 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
CHRNA7-227ENST00000637350 MT2AP02795 61 aa7.49□□□□□ -1.21
CHRNA7-227ENST00000637350 MT1FP04733 61 aa7.46□□□□□ -1.22
CHRNA7-227ENST00000637350 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
CHRNA7-227ENST00000637350 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CHRNA7-227ENST00000637350 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
CHRNA7-227ENST00000637350 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
CHRNA7-227ENST00000637350 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
CHRNA7-227ENST00000637350 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
CHRNA7-227ENST00000637350 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
CHRNA7-227ENST00000637350 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
CHRNA7-227ENST00000637350 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
CHRNA7-227ENST00000637350 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
CHRNA7-227ENST00000637350 TNP1P09430 55 aa7.13□□□□□ -1.27
CHRNA7-227ENST00000637350 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
CHRNA7-227ENST00000637350 MT1BP07438 61 aa7.08□□□□□ -1.28
CHRNA7-227ENST00000637350 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
CHRNA7-227ENST00000637350 LCE2BO14633 110 aa7.01□□□□□ -1.29
CHRNA7-227ENST00000637350 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CHRNA7-227ENST00000637350 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
CHRNA7-227ENST00000637350 MT1XP80297 61 aa6.89□□□□□ -1.31
CHRNA7-227ENST00000637350 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
CHRNA7-227ENST00000637350 USH2AO75445 5202 aa6.82□□□□□ -1.32
CHRNA7-227ENST00000637350 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
CHRNA7-227ENST00000637350 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
CHRNA7-227ENST00000637350 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
CHRNA7-227ENST00000637350 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
CHRNA7-227ENST00000637350 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
CHRNA7-227ENST00000637350 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
CHRNA7-227ENST00000637350 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
CHRNA7-227ENST00000637350 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
CHRNA7-227ENST00000637350 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
CHRNA7-227ENST00000637350 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
CHRNA7-227ENST00000637350 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
CHRNA7-227ENST00000637350 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
CHRNA7-227ENST00000637350 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
CHRNA7-227ENST00000637350 KMT2DO14686 5537 aa6.46□□□□□ -1.38
CHRNA7-227ENST00000637350 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
CHRNA7-227ENST00000637350 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
CHRNA7-227ENST00000637350 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
CHRNA7-227ENST00000637350 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
CHRNA7-227ENST00000637350 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.4
CHRNA7-227ENST00000637350 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
CHRNA7-227ENST00000637350 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.43
CHRNA7-227ENST00000637350 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.43
CHRNA7-227ENST00000637350 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms