RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 A8MUN3 132 aa10.63□□□□□ -0.71
CLN8-213ENST00000637156 RNF213Q63HN8 5207 aa10.62□□□□□ -0.71
CLN8-213ENST00000637156 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
CLN8-213ENST00000637156 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
CLN8-213ENST00000637156 Q5VV11 94 aa10.61□□□□□ -0.71
CLN8-213ENST00000637156 PRR15LQ9BU68 103 aa10.57□□□□□ -0.72
CLN8-213ENST00000637156 KRTAP19-2Q3LHN2 52 aa10.55□□□□□ -0.72
CLN8-213ENST00000637156 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
CLN8-213ENST00000637156 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
CLN8-213ENST00000637156 FAT4Q6V0I7 4981 aa10.4□□□□□ -0.74
CLN8-213ENST00000637156 LCA10Q71F78 164 aa10.38□□□□□ -0.75
CLN8-213ENST00000637156 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
CLN8-213ENST00000637156 A6NED7 52 aa10.37□□□□□ -0.75
CLN8-213ENST00000637156 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
CLN8-213ENST00000637156 S4R3F8 94 aa10.36□□□□□ -0.75
CLN8-213ENST00000637156 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
CLN8-213ENST00000637156 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
CLN8-213ENST00000637156 A0A1B0GU69 56 aa10.27□□□□□ -0.77
CLN8-213ENST00000637156 SPTSSBQ8NFR3 76 aa10.25□□□□□ -0.77
CLN8-213ENST00000637156 A8MU10 97 aa10.18□□□□□ -0.78
CLN8-213ENST00000637156 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
CLN8-213ENST00000637156 MT1HP80294 61 aa10.13□□□□□ -0.79
CLN8-213ENST00000637156 PMAIP1Q13794 54 aa10.09□□□□□ -0.79
CLN8-213ENST00000637156 UQCR11O14957 56 aa10.08□□□□□ -0.8
CLN8-213ENST00000637156 SEC61GP60059 68 aa10.08□□□□□ -0.8
CLN8-213ENST00000637156 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
CLN8-213ENST00000637156 M0R2T5 61 aa9.99□□□□□ -0.81
CLN8-213ENST00000637156 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
CLN8-213ENST00000637156 A6NN06 94 aa9.97□□□□□ -0.81
CLN8-213ENST00000637156 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.81
CLN8-213ENST00000637156 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
CLN8-213ENST00000637156 H0YAA0 97 aa9.92□□□□□ -0.82
CLN8-213ENST00000637156 ADM2Q7Z4H4 148 aa9.92□□□□□ -0.82
CLN8-213ENST00000637156 P0C880 135 aa9.87□□□□□ -0.83
CLN8-213ENST00000637156 KTN1-AS1Q86SY8 53 aa9.87□□□□□ -0.83
CLN8-213ENST00000637156 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
CLN8-213ENST00000637156 A0A1B0GU33 70 aa9.79□□□□□ -0.84
CLN8-213ENST00000637156 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
CLN8-213ENST00000637156 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
CLN8-213ENST00000637156 MT2AP02795 61 aa9.69□□□□□ -0.86
CLN8-213ENST00000637156 MT1FP04733 61 aa9.64□□□□□ -0.87
CLN8-213ENST00000637156 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
CLN8-213ENST00000637156 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
CLN8-213ENST00000637156 R4GN34 69 aa9.56□□□□□ -0.88
CLN8-213ENST00000637156 M0QZ58 72 aa9.55□□□□□ -0.88
CLN8-213ENST00000637156 CRIPTQ9P021 101 aa9.52□□□□□ -0.89
CLN8-213ENST00000637156 K7ERS5 55 aa9.48□□□□□ -0.89
CLN8-213ENST00000637156 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
CLN8-213ENST00000637156 SPRR2GQ9BYE4 73 aa9.42□□□□□ -0.9
CLN8-213ENST00000637156 KRTAP9-3Q9BYQ3 159 aa9.42□□□□□ -0.9
CLN8-213ENST00000637156 A0A0D9SG42 100 aa9.4□□□□□ -0.9
CLN8-213ENST00000637156 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
CLN8-213ENST00000637156 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
CLN8-213ENST00000637156 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
CLN8-213ENST00000637156 KRTAP12-2P59991 146 aa9.21□□□□□ -0.93
CLN8-213ENST00000637156 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
CLN8-213ENST00000637156 LCE2BO14633 110 aa9.19□□□□□ -0.94
CLN8-213ENST00000637156 KRTAP19-8Q3LI54 63 aa9.19□□□□□ -0.94
CLN8-213ENST00000637156 ROMO1P60602 79 aa9.15□□□□□ -0.95
CLN8-213ENST00000637156 MT1BP07438 61 aa9.1□□□□□ -0.95
CLN8-213ENST00000637156 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
CLN8-213ENST00000637156 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
CLN8-213ENST00000637156 USH2AO75445 5202 aa9.02□□□□□ -0.97
CLN8-213ENST00000637156 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
CLN8-213ENST00000637156 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
CLN8-213ENST00000637156 FSIP2Q5CZC0 6907 aa8.91□□□□□ -0.98
CLN8-213ENST00000637156 SSPOA2VEC9 5147 aa8.79□□□□□ -1
CLN8-213ENST00000637156 MT1XP80297 61 aa8.77□□□□□ -1.01
CLN8-213ENST00000637156 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
CLN8-213ENST00000637156 KRTAP10-5P60370 271 aa8.76□□□□□ -1.01
CLN8-213ENST00000637156 KRTAP9-2Q9BYQ4 174 aa8.72□□□□□ -1.01
CLN8-213ENST00000637156 KRTAP19-6Q3LI70 58 aa8.62□□□□□ -1.03
CLN8-213ENST00000637156 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
CLN8-213ENST00000637156 TNP1P09430 55 aa8.47□□□□□ -1.05
CLN8-213ENST00000637156 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
CLN8-213ENST00000637156 FCGBPQ9Y6R7 5405 aaPredicted RBP8.4□□□□□ -1.07
CLN8-213ENST00000637156 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
CLN8-213ENST00000637156 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
CLN8-213ENST00000637156 KRTAP10-12P60413 245 aa8.3□□□□□ -1.08
CLN8-213ENST00000637156 KMT2DO14686 5537 aa8.24□□□□□ -1.09
CLN8-213ENST00000637156 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
CLN8-213ENST00000637156 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
CLN8-213ENST00000637156 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
CLN8-213ENST00000637156 KRTAP4-8Q9BYQ9 185 aa8.17□□□□□ -1.1
CLN8-213ENST00000637156 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
CLN8-213ENST00000637156 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.12
CLN8-213ENST00000637156 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
CLN8-213ENST00000637156 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
CLN8-213ENST00000637156 SYNE2Q8WXH0 6885 aaKnown RBP7.89□□□□□ -1.15
CLN8-213ENST00000637156 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
CLN8-213ENST00000637156 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
CLN8-213ENST00000637156 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
CLN8-213ENST00000637156 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
CLN8-213ENST00000637156 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
CLN8-213ENST00000637156 MT1EP04732 61 aa7.68□□□□□ -1.18
CLN8-213ENST00000637156 H3BS24 57 aa7.68□□□□□ -1.18
CLN8-213ENST00000637156 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.19
CLN8-213ENST00000637156 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
CLN8-213ENST00000637156 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
CLN8-213ENST00000637156 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms