RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
UPF3B-205ENST00000636792 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
UPF3B-205ENST00000636792 Q5W150 140 aa3.48□□□□□ -1.85
UPF3B-205ENST00000636792 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
UPF3B-205ENST00000636792 MP68P56378 58 aa3.47□□□□□ -1.85
UPF3B-205ENST00000636792 SPINK7P58062 85 aa3.47□□□□□ -1.85
UPF3B-205ENST00000636792 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
UPF3B-205ENST00000636792 MPLKIPQ8TAP9 179 aa3.46□□□□□ -1.86
UPF3B-205ENST00000636792 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.86
UPF3B-205ENST00000636792 TRAV7A0A075B6U4 112 aa3.45□□□□□ -1.86
UPF3B-205ENST00000636792 H0Y9P7 68 aa3.45□□□□□ -1.86
UPF3B-205ENST00000636792 HRES1P13985 223 aa3.44□□□□□ -1.86
UPF3B-205ENST00000636792 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
UPF3B-205ENST00000636792 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
UPF3B-205ENST00000636792 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
UPF3B-205ENST00000636792 MT3P25713 68 aa3.41□□□□□ -1.86
UPF3B-205ENST00000636792 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
UPF3B-205ENST00000636792 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
UPF3B-205ENST00000636792 CYP4F30PQ9H0H9 118 aa3.41□□□□□ -1.86
UPF3B-205ENST00000636792 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
UPF3B-205ENST00000636792 LINC00208Q96KT6 92 aa3.4□□□□□ -1.87
UPF3B-205ENST00000636792 FAM236DA0A1B0GTK5 79 aa3.39□□□□□ -1.87
UPF3B-205ENST00000636792 FAM236CP0DP71 79 aa3.39□□□□□ -1.87
UPF3B-205ENST00000636792 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
UPF3B-205ENST00000636792 A8MUN3 132 aa3.38□□□□□ -1.87
UPF3B-205ENST00000636792 COX7CP15954 63 aa3.37□□□□□ -1.87
UPF3B-205ENST00000636792 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
UPF3B-205ENST00000636792 NDUFC1O43677 76 aa3.35□□□□□ -1.87
UPF3B-205ENST00000636792 H1FX-AS1Q4G0G2 97 aa3.35□□□□□ -1.87
UPF3B-205ENST00000636792 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
UPF3B-205ENST00000636792 ANAPC13Q9BS18 74 aa3.34□□□□□ -1.87
UPF3B-205ENST00000636792 MT1HP80294 61 aa3.33□□□□□ -1.88
UPF3B-205ENST00000636792 C20orf197Q8N268 126 aa3.33□□□□□ -1.88
UPF3B-205ENST00000636792 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
UPF3B-205ENST00000636792 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
UPF3B-205ENST00000636792 DMAC1Q96GE9 116 aa3.31□□□□□ -1.88
UPF3B-205ENST00000636792 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
UPF3B-205ENST00000636792 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
UPF3B-205ENST00000636792 M0R2T5 61 aa3.29□□□□□ -1.88
UPF3B-205ENST00000636792 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
UPF3B-205ENST00000636792 SNURFQ9Y675 71 aa3.28□□□□□ -1.88
UPF3B-205ENST00000636792 S4R3F8 94 aa3.28□□□□□ -1.88
UPF3B-205ENST00000636792 ACYP2P14621 99 aa3.27□□□□□ -1.89
UPF3B-205ENST00000636792 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
UPF3B-205ENST00000636792 H7BZZ5 65 aa3.26□□□□□ -1.89
UPF3B-205ENST00000636792 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
UPF3B-205ENST00000636792 CSAG1Q6PB30 78 aa3.24□□□□□ -1.89
UPF3B-205ENST00000636792 LCA10Q71F78 164 aa3.24□□□□□ -1.89
UPF3B-205ENST00000636792 SPTSSBQ8NFR3 76 aa3.24□□□□□ -1.89
UPF3B-205ENST00000636792 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
UPF3B-205ENST00000636792 H0YAA0 97 aa3.22□□□□□ -1.89
UPF3B-205ENST00000636792 CCDC179H3BU77 68 aa3.21□□□□□ -1.9
UPF3B-205ENST00000636792 TMEM258P61165 79 aa3.21□□□□□ -1.9
UPF3B-205ENST00000636792 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
UPF3B-205ENST00000636792 CYSTM1Q9H1C7 97 aa3.19□□□□□ -1.9
UPF3B-205ENST00000636792 COA5Q86WW8 74 aa3.16□□□□□ -1.9
UPF3B-205ENST00000636792 MT2AP02795 61 aa3.15□□□□□ -1.91
UPF3B-205ENST00000636792 SVIPQ8NHG7 77 aa3.14□□□□□ -1.91
UPF3B-205ENST00000636792 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
UPF3B-205ENST00000636792 PCP4P48539 62 aa3.13□□□□□ -1.91
UPF3B-205ENST00000636792 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
UPF3B-205ENST00000636792 MT1FP04733 61 aa3.11□□□□□ -1.91
UPF3B-205ENST00000636792 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
UPF3B-205ENST00000636792 SEC61GP60059 68 aa3.08□□□□□ -1.92
UPF3B-205ENST00000636792 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
UPF3B-205ENST00000636792 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
UPF3B-205ENST00000636792 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
UPF3B-205ENST00000636792 R4GN34 69 aa3.04□□□□□ -1.92
UPF3B-205ENST00000636792 M0QZ58 72 aa3.03□□□□□ -1.92
UPF3B-205ENST00000636792 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
UPF3B-205ENST00000636792 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
UPF3B-205ENST00000636792 A0A1B0GU69 56 aa3.02□□□□□ -1.93
UPF3B-205ENST00000636792 P0C880 135 aa3.02□□□□□ -1.93
UPF3B-205ENST00000636792 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
UPF3B-205ENST00000636792 V9GYY9 64 aa3.02□□□□□ -1.93
UPF3B-205ENST00000636792 Q5VV11 94 aa3.01□□□□□ -1.93
UPF3B-205ENST00000636792 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
UPF3B-205ENST00000636792 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
UPF3B-205ENST00000636792 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
UPF3B-205ENST00000636792 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
UPF3B-205ENST00000636792 A6NN06 94 aa2.98□□□□□ -1.93
UPF3B-205ENST00000636792 Q1T7F1 81 aa2.97□□□□□ -1.93
UPF3B-205ENST00000636792 A0A1B0GU33 70 aa2.96□□□□□ -1.94
UPF3B-205ENST00000636792 MT1BP07438 61 aa2.93□□□□□ -1.94
UPF3B-205ENST00000636792 USH2AO75445 5202 aa2.92□□□□□ -1.94
UPF3B-205ENST00000636792 UQCR11O14957 56 aa2.92□□□□□ -1.94
UPF3B-205ENST00000636792 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
UPF3B-205ENST00000636792 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
UPF3B-205ENST00000636792 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
UPF3B-205ENST00000636792 NEBP20929 6669 aa2.9□□□□□ -1.95
UPF3B-205ENST00000636792 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
UPF3B-205ENST00000636792 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
UPF3B-205ENST00000636792 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
UPF3B-205ENST00000636792 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
UPF3B-205ENST00000636792 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
UPF3B-205ENST00000636792 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
UPF3B-205ENST00000636792 SPATA8Q6RVD6 105 aa2.86□□□□□ -1.95
UPF3B-205ENST00000636792 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
UPF3B-205ENST00000636792 PSPHP1O15172 72 aa2.85□□□□□ -1.95
UPF3B-205ENST00000636792 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms