RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
LINC01108-202ENST00000635227 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
LINC01108-202ENST00000635227 H0Y9P7 68 aa4.09□□□□□ -1.75
LINC01108-202ENST00000635227 Q96NJ1 140 aa4.09□□□□□ -1.75
LINC01108-202ENST00000635227 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
LINC01108-202ENST00000635227 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.76
LINC01108-202ENST00000635227 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
LINC01108-202ENST00000635227 IGHV6-1A0A0B4J1U7 121 aa4.07□□□□□ -1.76
LINC01108-202ENST00000635227 Q5XG85 94 aa4.07□□□□□ -1.76
LINC01108-202ENST00000635227 NDUFS5O43920 106 aa4.06□□□□□ -1.76
LINC01108-202ENST00000635227 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
LINC01108-202ENST00000635227 ZCCHC13Q8WW36 166 aaKnown RBP4.06□□□□□ -1.76
LINC01108-202ENST00000635227 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
LINC01108-202ENST00000635227 MRPL34Q9BQ48 92 aaKnown RBP4.06□□□□□ -1.76
LINC01108-202ENST00000635227 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
LINC01108-202ENST00000635227 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
LINC01108-202ENST00000635227 SPINK6Q6UWN8 80 aa4.05□□□□□ -1.76
LINC01108-202ENST00000635227 SPANXA2-OT1Q8N9U9 137 aa4.05□□□□□ -1.76
LINC01108-202ENST00000635227 TNXBP22105 4242 aa4.04□□□□□ -1.76
LINC01108-202ENST00000635227 C1orf64Q8NEQ6 169 aa4.04□□□□□ -1.76
LINC01108-202ENST00000635227 Q5VSD8 79 aa4.03□□□□□ -1.76
LINC01108-202ENST00000635227 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
LINC01108-202ENST00000635227 SPINK1P00995 79 aa4.02□□□□□ -1.77
LINC01108-202ENST00000635227 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
LINC01108-202ENST00000635227 SPAG11AQ6PDA7 123 aa4.02□□□□□ -1.77
LINC01108-202ENST00000635227 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
LINC01108-202ENST00000635227 DNAH8Q96JB1 4490 aa4□□□□□ -1.77
LINC01108-202ENST00000635227 LINC00313P59037 77 aa4□□□□□ -1.77
LINC01108-202ENST00000635227 KRTAP13-2Q52LG2 175 aa3.99□□□□□ -1.77
LINC01108-202ENST00000635227 V9GYY9 64 aa3.99□□□□□ -1.77
LINC01108-202ENST00000635227 OXTP01178 125 aa3.98□□□□□ -1.77
LINC01108-202ENST00000635227 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
LINC01108-202ENST00000635227 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
LINC01108-202ENST00000635227 C1orf195Q5TG92 126 aa3.97□□□□□ -1.77
LINC01108-202ENST00000635227 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
LINC01108-202ENST00000635227 PCOTHQ58A44 107 aa3.93□□□□□ -1.78
LINC01108-202ENST00000635227 Q1T7F1 81 aa3.92□□□□□ -1.78
LINC01108-202ENST00000635227 FP248Q71RG6 208 aaPredicted RBP3.92□□□□□ -1.78
LINC01108-202ENST00000635227 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
LINC01108-202ENST00000635227 COA5Q86WW8 74 aa3.9□□□□□ -1.79
LINC01108-202ENST00000635227 Q5W150 140 aa3.89□□□□□ -1.79
LINC01108-202ENST00000635227 ACYP2P14621 99 aa3.88□□□□□ -1.79
LINC01108-202ENST00000635227 LPAP08519 4548 aa3.87□□□□□ -1.79
LINC01108-202ENST00000635227 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
LINC01108-202ENST00000635227 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
LINC01108-202ENST00000635227 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
LINC01108-202ENST00000635227 C7orf65Q6ZTY9 151 aa3.86□□□□□ -1.79
LINC01108-202ENST00000635227 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
LINC01108-202ENST00000635227 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
LINC01108-202ENST00000635227 DMAC1Q96GE9 116 aa3.84□□□□□ -1.79
LINC01108-202ENST00000635227 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
LINC01108-202ENST00000635227 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
LINC01108-202ENST00000635227 HRES1P13985 223 aa3.83□□□□□ -1.8
LINC01108-202ENST00000635227 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
LINC01108-202ENST00000635227 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
LINC01108-202ENST00000635227 A8MUN3 132 aa3.82□□□□□ -1.8
LINC01108-202ENST00000635227 RETNLBQ9BQ08 111 aa3.82□□□□□ -1.8
LINC01108-202ENST00000635227 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
LINC01108-202ENST00000635227 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
LINC01108-202ENST00000635227 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
LINC01108-202ENST00000635227 A8MUU9 505 aa3.8□□□□□ -1.8
LINC01108-202ENST00000635227 PSPHP1O15172 72 aa3.8□□□□□ -1.8
LINC01108-202ENST00000635227 SPTSSBQ8NFR3 76 aa3.8□□□□□ -1.8
LINC01108-202ENST00000635227 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
LINC01108-202ENST00000635227 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
LINC01108-202ENST00000635227 NEBP20929 6669 aa3.76□□□□□ -1.81
LINC01108-202ENST00000635227 Q5VV11 94 aa3.76□□□□□ -1.81
LINC01108-202ENST00000635227 A6NED7 52 aa3.75□□□□□ -1.81
LINC01108-202ENST00000635227 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
LINC01108-202ENST00000635227 ATP11AUNQ6ZP68 121 aa3.74□□□□□ -1.81
LINC01108-202ENST00000635227 A0A1B0GU69 56 aa3.73□□□□□ -1.81
LINC01108-202ENST00000635227 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
LINC01108-202ENST00000635227 SEC61GP60059 68 aa3.72□□□□□ -1.81
LINC01108-202ENST00000635227 SPINK7P58062 85 aa3.7□□□□□ -1.82
LINC01108-202ENST00000635227 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
LINC01108-202ENST00000635227 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
LINC01108-202ENST00000635227 USH2AO75445 5202 aa3.69□□□□□ -1.82
LINC01108-202ENST00000635227 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
LINC01108-202ENST00000635227 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
LINC01108-202ENST00000635227 UQCR11O14957 56 aa3.65□□□□□ -1.83
LINC01108-202ENST00000635227 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
LINC01108-202ENST00000635227 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
LINC01108-202ENST00000635227 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
LINC01108-202ENST00000635227 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
LINC01108-202ENST00000635227 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
LINC01108-202ENST00000635227 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
LINC01108-202ENST00000635227 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
LINC01108-202ENST00000635227 LCA10Q71F78 164 aa3.6□□□□□ -1.83
LINC01108-202ENST00000635227 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
LINC01108-202ENST00000635227 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
LINC01108-202ENST00000635227 RBM12B-AS1Q9P1G2 102 aa3.58□□□□□ -1.84
LINC01108-202ENST00000635227 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
LINC01108-202ENST00000635227 S4R3F8 94 aa3.57□□□□□ -1.84
LINC01108-202ENST00000635227 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
LINC01108-202ENST00000635227 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
LINC01108-202ENST00000635227 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
LINC01108-202ENST00000635227 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
LINC01108-202ENST00000635227 A0A1B0GU33 70 aa3.53□□□□□ -1.84
LINC01108-202ENST00000635227 A6NN06 94 aa3.53□□□□□ -1.84
LINC01108-202ENST00000635227 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms