RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
PNKP-222ENST00000629088 TMEM258P61165 79 aa7.32□□□□□ -1.24
PNKP-222ENST00000629088 CASC2Q6XLA1 102 aa7.32□□□□□ -1.24
PNKP-222ENST00000629088 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
PNKP-222ENST00000629088 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
PNKP-222ENST00000629088 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
PNKP-222ENST00000629088 C4orf26Q17RF5 130 aa7.27□□□□□ -1.25
PNKP-222ENST00000629088 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
PNKP-222ENST00000629088 OCR1Q9BZK8 76 aa7.22□□□□□ -1.25
PNKP-222ENST00000629088 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
PNKP-222ENST00000629088 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
PNKP-222ENST00000629088 H7BZZ5 65 aa7.17□□□□□ -1.26
PNKP-222ENST00000629088 CSAG1Q6PB30 78 aa7.17□□□□□ -1.26
PNKP-222ENST00000629088 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
PNKP-222ENST00000629088 S4R3F8 94 aa7.17□□□□□ -1.26
PNKP-222ENST00000629088 A6NN06 94 aa7.16□□□□□ -1.26
PNKP-222ENST00000629088 KRTAP20-1Q3LI63 56 aa7.16□□□□□ -1.26
PNKP-222ENST00000629088 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.26
PNKP-222ENST00000629088 TP53AIP1Q9HCN2 124 aa7.15□□□□□ -1.26
PNKP-222ENST00000629088 MT1BP07438 61 aa7.14□□□□□ -1.27
PNKP-222ENST00000629088 Q5VV11 94 aa7.14□□□□□ -1.27
PNKP-222ENST00000629088 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
PNKP-222ENST00000629088 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
PNKP-222ENST00000629088 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
PNKP-222ENST00000629088 NDUFC1O43677 76 aa7.11□□□□□ -1.27
PNKP-222ENST00000629088 LCA10Q71F78 164 aa7.11□□□□□ -1.27
PNKP-222ENST00000629088 SERP1Q9Y6X1 66 aa7.11□□□□□ -1.27
PNKP-222ENST00000629088 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
PNKP-222ENST00000629088 KMT2DO14686 5537 aa7.08□□□□□ -1.28
PNKP-222ENST00000629088 H3BPC8 53 aa7.07□□□□□ -1.28
PNKP-222ENST00000629088 MP68P56378 58 aa7.07□□□□□ -1.28
PNKP-222ENST00000629088 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
PNKP-222ENST00000629088 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
PNKP-222ENST00000629088 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
PNKP-222ENST00000629088 H0Y9P7 68 aa7.03□□□□□ -1.28
PNKP-222ENST00000629088 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
PNKP-222ENST00000629088 CRIPTQ9P021 101 aa7□□□□□ -1.29
PNKP-222ENST00000629088 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
PNKP-222ENST00000629088 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
PNKP-222ENST00000629088 SMIM26A0A096LP01 95 aa6.97□□□□□ -1.29
PNKP-222ENST00000629088 CYP4F30PQ9H0H9 118 aa6.97□□□□□ -1.29
PNKP-222ENST00000629088 LOC101927531A0A1B0GV80 90 aa6.95□□□□□ -1.3
PNKP-222ENST00000629088 H0YAA0 97 aa6.87□□□□□ -1.31
PNKP-222ENST00000629088 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
PNKP-222ENST00000629088 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
PNKP-222ENST00000629088 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
PNKP-222ENST00000629088 A8MUN3 132 aa6.77□□□□□ -1.33
PNKP-222ENST00000629088 PRO0628Q9UI54 55 aa6.74□□□□□ -1.33
PNKP-222ENST00000629088 Q1T7F1 81 aa6.73□□□□□ -1.33
PNKP-222ENST00000629088 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
PNKP-222ENST00000629088 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
PNKP-222ENST00000629088 SPRR2EP22531 72 aa6.72□□□□□ -1.33
PNKP-222ENST00000629088 SPRR2BP35325 72 aa6.72□□□□□ -1.33
PNKP-222ENST00000629088 SPRR2AP35326 72 aa6.72□□□□□ -1.33
PNKP-222ENST00000629088 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
PNKP-222ENST00000629088 ACYP2P14621 99 aa6.65□□□□□ -1.34
PNKP-222ENST00000629088 DMAC1Q96GE9 116 aa6.65□□□□□ -1.34
PNKP-222ENST00000629088 MT1XP80297 61 aa6.64□□□□□ -1.35
PNKP-222ENST00000629088 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
PNKP-222ENST00000629088 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
PNKP-222ENST00000629088 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
PNKP-222ENST00000629088 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
PNKP-222ENST00000629088 V9GYY9 64 aa6.63□□□□□ -1.35
PNKP-222ENST00000629088 COA5Q86WW8 74 aa6.62□□□□□ -1.35
PNKP-222ENST00000629088 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
PNKP-222ENST00000629088 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
PNKP-222ENST00000629088 PSPHP1O15172 72 aa6.58□□□□□ -1.36
PNKP-222ENST00000629088 R4GN34 69 aa6.58□□□□□ -1.36
PNKP-222ENST00000629088 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
PNKP-222ENST00000629088 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
PNKP-222ENST00000629088 P0C880 135 aa6.51□□□□□ -1.37
PNKP-222ENST00000629088 SPRR2DP22532 72 aa6.5□□□□□ -1.37
PNKP-222ENST00000629088 M0QZ58 72 aa6.49□□□□□ -1.37
PNKP-222ENST00000629088 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
PNKP-222ENST00000629088 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
PNKP-222ENST00000629088 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
PNKP-222ENST00000629088 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
PNKP-222ENST00000629088 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
PNKP-222ENST00000629088 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
PNKP-222ENST00000629088 GPR98Q8WXG9 6306 aa6.39□□□□□ -1.39
PNKP-222ENST00000629088 A8MU10 97 aa6.39□□□□□ -1.39
PNKP-222ENST00000629088 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
PNKP-222ENST00000629088 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
PNKP-222ENST00000629088 A6NED7 52 aa6.35□□□□□ -1.39
PNKP-222ENST00000629088 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
PNKP-222ENST00000629088 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
PNKP-222ENST00000629088 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
PNKP-222ENST00000629088 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
PNKP-222ENST00000629088 A0A1B0GU69 56 aa6.28□□□□□ -1.4
PNKP-222ENST00000629088 SEC61GP60059 68 aa6.27□□□□□ -1.41
PNKP-222ENST00000629088 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
PNKP-222ENST00000629088 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
PNKP-222ENST00000629088 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
PNKP-222ENST00000629088 UQCR11O14957 56 aa6.12□□□□□ -1.43
PNKP-222ENST00000629088 A0A1B0GU33 70 aa6.07□□□□□ -1.44
PNKP-222ENST00000629088 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
PNKP-222ENST00000629088 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
PNKP-222ENST00000629088 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
PNKP-222ENST00000629088 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
PNKP-222ENST00000629088 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms