RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 LCA10Q71F78 164 aa12.28□□□□□ -0.44
CAPNS1-215ENST00000628018 SMIM26A0A096LP01 95 aa12.26□□□□□ -0.45
CAPNS1-215ENST00000628018 KRTAP3-3Q9BYR6 98 aa12.26□□□□□ -0.45
CAPNS1-215ENST00000628018 SPTSSBQ8NFR3 76 aa12.21□□□□□ -0.46
CAPNS1-215ENST00000628018 LCE2CQ5TA81 110 aa12.18□□□□□ -0.46
CAPNS1-215ENST00000628018 Q1T7F1 81 aa12.08□□□□□ -0.48
CAPNS1-215ENST00000628018 FLGP20930 4061 aaPredicted RBP12.06□□□□□ -0.48
CAPNS1-215ENST00000628018 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
CAPNS1-215ENST00000628018 LINC01558Q9Y6Z2 57 aa12.03□□□□□ -0.48
CAPNS1-215ENST00000628018 V9GYY9 64 aa12.03□□□□□ -0.48
CAPNS1-215ENST00000628018 FAT4Q6V0I7 4981 aa11.94□□□□□ -0.5
CAPNS1-215ENST00000628018 MT1HP80294 61 aa11.93□□□□□ -0.5
CAPNS1-215ENST00000628018 A0A1B0GU69 56 aa11.87□□□□□ -0.51
CAPNS1-215ENST00000628018 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
CAPNS1-215ENST00000628018 PSPHP1O15172 72 aa11.84□□□□□ -0.51
CAPNS1-215ENST00000628018 SEC61GP60059 68 aa11.83□□□□□ -0.52
CAPNS1-215ENST00000628018 H0YAA0 97 aa11.8□□□□□ -0.52
CAPNS1-215ENST00000628018 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
CAPNS1-215ENST00000628018 M0R2T5 61 aa11.76□□□□□ -0.53
CAPNS1-215ENST00000628018 Q5VV11 94 aa11.76□□□□□ -0.53
CAPNS1-215ENST00000628018 SVIPQ8NHG7 77 aa11.76□□□□□ -0.53
CAPNS1-215ENST00000628018 KRTAP10-6P60371 365 aaPredicted RBP11.74□□□□□ -0.53
CAPNS1-215ENST00000628018 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
CAPNS1-215ENST00000628018 P0C880 135 aa11.66□□□□□ -0.54
CAPNS1-215ENST00000628018 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
CAPNS1-215ENST00000628018 A0A1B0GU33 70 aa11.57□□□□□ -0.56
CAPNS1-215ENST00000628018 UQCR11O14957 56 aa11.5□□□□□ -0.57
CAPNS1-215ENST00000628018 KRTAP9-8Q9BYQ0 159 aa11.49□□□□□ -0.57
CAPNS1-215ENST00000628018 A6NED7 52 aa11.47□□□□□ -0.57
CAPNS1-215ENST00000628018 LORP23490 312 aaPredicted RBP11.45□□□□□ -0.58
CAPNS1-215ENST00000628018 MT2AP02795 61 aa11.43□□□□□ -0.58
CAPNS1-215ENST00000628018 KRTAP13-4Q3LI77 160 aa11.39□□□□□ -0.59
CAPNS1-215ENST00000628018 SPATA8Q6RVD6 105 aa11.38□□□□□ -0.59
CAPNS1-215ENST00000628018 M0QZ58 72 aa11.35□□□□□ -0.59
CAPNS1-215ENST00000628018 MT1FP04733 61 aa11.35□□□□□ -0.59
CAPNS1-215ENST00000628018 MIR22HGQ0VDD5 57 aa11.35□□□□□ -0.59
CAPNS1-215ENST00000628018 CRIPTQ9P021 101 aa11.33□□□□□ -0.6
CAPNS1-215ENST00000628018 R4GN34 69 aa11.33□□□□□ -0.6
CAPNS1-215ENST00000628018 KRTAP10-10P60014 251 aa11.3□□□□□ -0.6
CAPNS1-215ENST00000628018 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.61
CAPNS1-215ENST00000628018 BRK1Q8WUW1 75 aa11.25□□□□□ -0.61
CAPNS1-215ENST00000628018 A8MU10 97 aa11.21□□□□□ -0.61
CAPNS1-215ENST00000628018 PRO0628Q9UI54 55 aa11.19□□□□□ -0.62
CAPNS1-215ENST00000628018 SPRR2GQ9BYE4 73 aa11.14□□□□□ -0.63
CAPNS1-215ENST00000628018 A0A0D9SG42 100 aa11.13□□□□□ -0.63
CAPNS1-215ENST00000628018 KRTAP19-1Q8IUB9 90 aa11.12□□□□□ -0.63
CAPNS1-215ENST00000628018 LINC01554Q52M75 96 aa11.09□□□□□ -0.63
CAPNS1-215ENST00000628018 KRTAP9-3Q9BYQ3 159 aa11.08□□□□□ -0.64
CAPNS1-215ENST00000628018 KRTAP12-1P59990 96 aa10.95□□□□□ -0.66
CAPNS1-215ENST00000628018 A6NN06 94 aa10.94□□□□□ -0.66
CAPNS1-215ENST00000628018 KRTAP12-2P59991 146 aa10.91□□□□□ -0.66
CAPNS1-215ENST00000628018 SPINT4Q6UDR6 99 aa10.89□□□□□ -0.67
CAPNS1-215ENST00000628018 KRTAP19-8Q3LI54 63 aa10.88□□□□□ -0.67
CAPNS1-215ENST00000628018 K7ERS5 55 aa10.84□□□□□ -0.67
CAPNS1-215ENST00000628018 KRTAP9-2Q9BYQ4 174 aa10.81□□□□□ -0.68
CAPNS1-215ENST00000628018 LCE2BO14633 110 aa10.79□□□□□ -0.68
CAPNS1-215ENST00000628018 LCE2DQ5TA82 110 aaPredicted RBP10.74□□□□□ -0.69
CAPNS1-215ENST00000628018 MT1BP07438 61 aa10.74□□□□□ -0.69
CAPNS1-215ENST00000628018 PLAC4Q8WY50 150 aa10.7□□□□□ -0.7
CAPNS1-215ENST00000628018 PMAIP1Q13794 54 aa10.63□□□□□ -0.71
CAPNS1-215ENST00000628018 CAMK2N1Q7Z7J9 78 aa10.58□□□□□ -0.72
CAPNS1-215ENST00000628018 FSIP2Q5CZC0 6907 aa10.51□□□□□ -0.73
CAPNS1-215ENST00000628018 USH2AO75445 5202 aa10.45□□□□□ -0.74
CAPNS1-215ENST00000628018 ROMO1P60602 79 aa10.39□□□□□ -0.75
CAPNS1-215ENST00000628018 C10orf95Q9H7T3 257 aa10.38□□□□□ -0.75
CAPNS1-215ENST00000628018 MT1XP80297 61 aa10.35□□□□□ -0.75
CAPNS1-215ENST00000628018 KRTAP10-5P60370 271 aa10.33□□□□□ -0.76
CAPNS1-215ENST00000628018 CRCT1Q9UGL9 99 aa10.29□□□□□ -0.76
CAPNS1-215ENST00000628018 KTN1-AS1Q86SY8 53 aa10.28□□□□□ -0.76
CAPNS1-215ENST00000628018 KRTAP9-6A0A140TA67 174 aa10.27□□□□□ -0.77
CAPNS1-215ENST00000628018 PRO2289Q9P1D8 64 aa10.23□□□□□ -0.77
CAPNS1-215ENST00000628018 SSPOA2VEC9 5147 aa10.19□□□□□ -0.78
CAPNS1-215ENST00000628018 KRTAP19-6Q3LI70 58 aa10.17□□□□□ -0.78
CAPNS1-215ENST00000628018 KRTAP25-1Q3LHN0 102 aa10.07□□□□□ -0.8
CAPNS1-215ENST00000628018 TNP1P09430 55 aa10.06□□□□□ -0.8
CAPNS1-215ENST00000628018 PRAC1Q96KF2 57 aa9.97□□□□□ -0.81
CAPNS1-215ENST00000628018 KRTAP10-7P60409 375 aaPredicted RBP9.92□□□□□ -0.82
CAPNS1-215ENST00000628018 FCGBPQ9Y6R7 5405 aaPredicted RBP9.86□□□□□ -0.83
CAPNS1-215ENST00000628018 KRTAP10-12P60413 245 aa9.82□□□□□ -0.84
CAPNS1-215ENST00000628018 KRTAP23-1A1A580 65 aa9.74□□□□□ -0.85
CAPNS1-215ENST00000628018 PP632Q6XCG6 107 aa9.69□□□□□ -0.86
CAPNS1-215ENST00000628018 LCE3AQ5TA76 89 aa9.67□□□□□ -0.86
CAPNS1-215ENST00000628018 KRTAP4-8A0A0G2JLE6 195 aa9.57□□□□□ -0.88
CAPNS1-215ENST00000628018 KRTAP4-8Q9BYQ9 185 aa9.57□□□□□ -0.88
CAPNS1-215ENST00000628018 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
CAPNS1-215ENST00000628018 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
CAPNS1-215ENST00000628018 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
CAPNS1-215ENST00000628018 KMT2DO14686 5537 aa9.46□□□□□ -0.89
CAPNS1-215ENST00000628018 SYNE2Q8WXH0 6885 aaKnown RBP9.32□□□□□ -0.92
CAPNS1-215ENST00000628018 KRTAP19-5Q3LI72 72 aa9.31□□□□□ -0.92
CAPNS1-215ENST00000628018 KRTAP9-7A8MTY7 169 aa9.3□□□□□ -0.92
CAPNS1-215ENST00000628018 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
CAPNS1-215ENST00000628018 KRTAP19-7Q3SYF9 63 aa9.24□□□□□ -0.93
CAPNS1-215ENST00000628018 MT1EP04732 61 aa9.08□□□□□ -0.96
CAPNS1-215ENST00000628018 KRTAP6-3Q3LI67 103 aa9.07□□□□□ -0.96
CAPNS1-215ENST00000628018 KRTAP15-1Q3LI76 137 aa9.07□□□□□ -0.96
CAPNS1-215ENST00000628018 SPRR2FQ96RM1 72 aa8.99□□□□□ -0.97
CAPNS1-215ENST00000628018 KRTAP5-9P26371 169 aa8.97□□□□□ -0.97
CAPNS1-215ENST00000628018 MT1LQ93083 61 aa8.88□□□□□ -0.99
CAPNS1-215ENST00000628018 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms