RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 H0Y9P7 68 aa6.48□□□□□ -1.37
SOX2-OT-242ENST00000627501 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
SOX2-OT-242ENST00000627501 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
SOX2-OT-242ENST00000627501 ATOX1O00244 68 aa6.45□□□□□ -1.38
SOX2-OT-242ENST00000627501 OCR1Q9BZK8 76 aa6.45□□□□□ -1.38
SOX2-OT-242ENST00000627501 K7ERU9 68 aa6.42□□□□□ -1.38
SOX2-OT-242ENST00000627501 S4R3F8 94 aa6.41□□□□□ -1.38
SOX2-OT-242ENST00000627501 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
SOX2-OT-242ENST00000627501 MT-ATP8P03928 68 aa6.39□□□□□ -1.39
SOX2-OT-242ENST00000627501 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
SOX2-OT-242ENST00000627501 LCA10Q71F78 164 aa6.39□□□□□ -1.39
SOX2-OT-242ENST00000627501 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
SOX2-OT-242ENST00000627501 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
SOX2-OT-242ENST00000627501 MP68P56378 58 aa6.36□□□□□ -1.39
SOX2-OT-242ENST00000627501 IMUPQ9GZP8 106 aa6.36□□□□□ -1.39
SOX2-OT-242ENST00000627501 KLKP1Q107X0 134 aa6.35□□□□□ -1.39
SOX2-OT-242ENST00000627501 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
SOX2-OT-242ENST00000627501 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-242ENST00000627501 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
SOX2-OT-242ENST00000627501 H3BPC8 53 aa6.29□□□□□ -1.4
SOX2-OT-242ENST00000627501 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
SOX2-OT-242ENST00000627501 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
SOX2-OT-242ENST00000627501 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
SOX2-OT-242ENST00000627501 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
SOX2-OT-242ENST00000627501 A8MUN3 132 aa6.26□□□□□ -1.41
SOX2-OT-242ENST00000627501 MT1BP07438 61 aa6.23□□□□□ -1.41
SOX2-OT-242ENST00000627501 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
SOX2-OT-242ENST00000627501 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
SOX2-OT-242ENST00000627501 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
SOX2-OT-242ENST00000627501 NDUFC1O43677 76 aa6.19□□□□□ -1.42
SOX2-OT-242ENST00000627501 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
SOX2-OT-242ENST00000627501 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
SOX2-OT-242ENST00000627501 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
SOX2-OT-242ENST00000627501 H0YAA0 97 aa6.12□□□□□ -1.43
SOX2-OT-242ENST00000627501 Q5VV11 94 aa6.12□□□□□ -1.43
SOX2-OT-242ENST00000627501 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
SOX2-OT-242ENST00000627501 A6NN06 94 aa6.08□□□□□ -1.44
SOX2-OT-242ENST00000627501 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
SOX2-OT-242ENST00000627501 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
SOX2-OT-242ENST00000627501 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
SOX2-OT-242ENST00000627501 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
SOX2-OT-242ENST00000627501 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
SOX2-OT-242ENST00000627501 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
SOX2-OT-242ENST00000627501 ACYP2P14621 99 aa6.02□□□□□ -1.45
SOX2-OT-242ENST00000627501 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
SOX2-OT-242ENST00000627501 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SOX2-OT-242ENST00000627501 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
SOX2-OT-242ENST00000627501 P0C880 135 aa5.96□□□□□ -1.46
SOX2-OT-242ENST00000627501 COX7CP15954 63 aa5.93□□□□□ -1.46
SOX2-OT-242ENST00000627501 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
SOX2-OT-242ENST00000627501 NEBP20929 6669 aa5.9□□□□□ -1.46
SOX2-OT-242ENST00000627501 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
SOX2-OT-242ENST00000627501 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SOX2-OT-242ENST00000627501 R4GN34 69 aa5.87□□□□□ -1.47
SOX2-OT-242ENST00000627501 M0QZ58 72 aa5.84□□□□□ -1.47
SOX2-OT-242ENST00000627501 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
SOX2-OT-242ENST00000627501 H7BZZ5 65 aa5.83□□□□□ -1.48
SOX2-OT-242ENST00000627501 MT1XP80297 61 aa5.82□□□□□ -1.48
SOX2-OT-242ENST00000627501 COA5Q86WW8 74 aa5.81□□□□□ -1.48
SOX2-OT-242ENST00000627501 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
SOX2-OT-242ENST00000627501 KMT2DO14686 5537 aa5.81□□□□□ -1.48
SOX2-OT-242ENST00000627501 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
SOX2-OT-242ENST00000627501 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
SOX2-OT-242ENST00000627501 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
SOX2-OT-242ENST00000627501 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
SOX2-OT-242ENST00000627501 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SOX2-OT-242ENST00000627501 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
SOX2-OT-242ENST00000627501 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
SOX2-OT-242ENST00000627501 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
SOX2-OT-242ENST00000627501 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SOX2-OT-242ENST00000627501 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
SOX2-OT-242ENST00000627501 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
SOX2-OT-242ENST00000627501 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
SOX2-OT-242ENST00000627501 SEC61GP60059 68 aa5.59□□□□□ -1.51
SOX2-OT-242ENST00000627501 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
SOX2-OT-242ENST00000627501 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
SOX2-OT-242ENST00000627501 SPRR2EP22531 72 aa5.57□□□□□ -1.52
SOX2-OT-242ENST00000627501 SPRR2BP35325 72 aa5.57□□□□□ -1.52
SOX2-OT-242ENST00000627501 SPRR2AP35326 72 aa5.57□□□□□ -1.52
SOX2-OT-242ENST00000627501 ATP5EP56381 51 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-242ENST00000627501 H3BS24 57 aa5.54□□□□□ -1.52
SOX2-OT-242ENST00000627501 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
SOX2-OT-242ENST00000627501 A0A1B0GU33 70 aa5.51□□□□□ -1.53
SOX2-OT-242ENST00000627501 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SOX2-OT-242ENST00000627501 TMEM258P61165 79 aa5.49□□□□□ -1.53
SOX2-OT-242ENST00000627501 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SOX2-OT-242ENST00000627501 A0A0D9SG42 100 aa5.47□□□□□ -1.53
SOX2-OT-242ENST00000627501 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
SOX2-OT-242ENST00000627501 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
SOX2-OT-242ENST00000627501 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
SOX2-OT-242ENST00000627501 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
SOX2-OT-242ENST00000627501 SPRR2DP22532 72 aa5.38□□□□□ -1.55
SOX2-OT-242ENST00000627501 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SOX2-OT-242ENST00000627501 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
SOX2-OT-242ENST00000627501 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SOX2-OT-242ENST00000627501 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
SOX2-OT-242ENST00000627501 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SOX2-OT-242ENST00000627501 A8MU10 97 aa5.34□□□□□ -1.55
SOX2-OT-242ENST00000627501 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
SOX2-OT-242ENST00000627501 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms