RNA–Protein interactions for RNA: ENST00000625927.2

ACAA1-219, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-219ENST00000625927 KRTAP19-2Q3LHN2 52 aa11.21□□□□□ -0.61
ACAA1-219ENST00000625927 RNF213Q63HN8 5207 aa11.2□□□□□ -0.62
ACAA1-219ENST00000625927 SPTSSBQ8NFR3 76 aa11.15□□□□□ -0.62
ACAA1-219ENST00000625927 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
ACAA1-219ENST00000625927 Q1T7F1 81 aa11.05□□□□□ -0.64
ACAA1-219ENST00000625927 LCE2CQ5TA81 110 aa11.01□□□□□ -0.65
ACAA1-219ENST00000625927 LINC01558Q9Y6Z2 57 aa11□□□□□ -0.65
ACAA1-219ENST00000625927 V9GYY9 64 aa11□□□□□ -0.65
ACAA1-219ENST00000625927 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
ACAA1-219ENST00000625927 PRR15LQ9BU68 103 aa10.95□□□□□ -0.66
ACAA1-219ENST00000625927 PSPHP1O15172 72 aa10.94□□□□□ -0.66
ACAA1-219ENST00000625927 FLGP20930 4061 aaPredicted RBP10.93□□□□□ -0.66
ACAA1-219ENST00000625927 A0A1B0GU69 56 aa10.9□□□□□ -0.66
ACAA1-219ENST00000625927 SEC61GP60059 68 aa10.86□□□□□ -0.67
ACAA1-219ENST00000625927 FAT4Q6V0I7 4981 aa10.86□□□□□ -0.67
ACAA1-219ENST00000625927 MT1HP80294 61 aa10.82□□□□□ -0.68
ACAA1-219ENST00000625927 Q5VV11 94 aa10.8□□□□□ -0.68
ACAA1-219ENST00000625927 M0R2T5 61 aa10.77□□□□□ -0.68
ACAA1-219ENST00000625927 ADM2Q7Z4H4 148 aa10.76□□□□□ -0.69
ACAA1-219ENST00000625927 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
ACAA1-219ENST00000625927 KRTAP10-6P60371 365 aaPredicted RBP10.7□□□□□ -0.7
ACAA1-219ENST00000625927 P0C880 135 aa10.67□□□□□ -0.7
ACAA1-219ENST00000625927 H0YAA0 97 aa10.67□□□□□ -0.7
ACAA1-219ENST00000625927 A0A1B0GU33 70 aa10.6□□□□□ -0.71
ACAA1-219ENST00000625927 A6NED7 52 aa10.59□□□□□ -0.71
ACAA1-219ENST00000625927 UQCR11O14957 56 aa10.53□□□□□ -0.72
ACAA1-219ENST00000625927 SPATA8Q6RVD6 105 aa10.47□□□□□ -0.73
ACAA1-219ENST00000625927 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
ACAA1-219ENST00000625927 MIR22HGQ0VDD5 57 aa10.43□□□□□ -0.74
ACAA1-219ENST00000625927 KRTAP13-4Q3LI77 160 aa10.42□□□□□ -0.74
ACAA1-219ENST00000625927 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
ACAA1-219ENST00000625927 BRK1Q8WUW1 75 aa10.42□□□□□ -0.74
ACAA1-219ENST00000625927 KRTAP9-8Q9BYQ0 159 aa10.39□□□□□ -0.75
ACAA1-219ENST00000625927 MT2AP02795 61 aa10.37□□□□□ -0.75
ACAA1-219ENST00000625927 R4GN34 69 aa10.37□□□□□ -0.75
ACAA1-219ENST00000625927 A8MU10 97 aa10.36□□□□□ -0.75
ACAA1-219ENST00000625927 M0QZ58 72 aa10.36□□□□□ -0.75
ACAA1-219ENST00000625927 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
ACAA1-219ENST00000625927 MT1FP04733 61 aa10.32□□□□□ -0.76
ACAA1-219ENST00000625927 KRTAP10-10P60014 251 aa10.31□□□□□ -0.76
ACAA1-219ENST00000625927 A0A0D9SG42 100 aa10.28□□□□□ -0.76
ACAA1-219ENST00000625927 CRIPTQ9P021 101 aa10.24□□□□□ -0.77
ACAA1-219ENST00000625927 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
ACAA1-219ENST00000625927 KRTAP19-1Q8IUB9 90 aa10.08□□□□□ -0.8
ACAA1-219ENST00000625927 SPRR2GQ9BYE4 73 aa10.07□□□□□ -0.8
ACAA1-219ENST00000625927 PRO0628Q9UI54 55 aa10.06□□□□□ -0.8
ACAA1-219ENST00000625927 SPINT4Q6UDR6 99 aa10.03□□□□□ -0.8
ACAA1-219ENST00000625927 KRTAP9-3Q9BYQ3 159 aa10.01□□□□□ -0.81
ACAA1-219ENST00000625927 KRTAP12-1P59990 96 aa10□□□□□ -0.81
ACAA1-219ENST00000625927 KRTAP12-2P59991 146 aa9.99□□□□□ -0.81
ACAA1-219ENST00000625927 K7ERS5 55 aa9.96□□□□□ -0.82
ACAA1-219ENST00000625927 A6NN06 94 aa9.89□□□□□ -0.83
ACAA1-219ENST00000625927 PMAIP1Q13794 54 aa9.82□□□□□ -0.84
ACAA1-219ENST00000625927 KRTAP19-8Q3LI54 63 aa9.81□□□□□ -0.84
ACAA1-219ENST00000625927 LCE2BO14633 110 aa9.78□□□□□ -0.84
ACAA1-219ENST00000625927 PLAC4Q8WY50 150 aa9.78□□□□□ -0.84
ACAA1-219ENST00000625927 MT1BP07438 61 aa9.73□□□□□ -0.85
ACAA1-219ENST00000625927 CAMK2N1Q7Z7J9 78 aa9.71□□□□□ -0.85
ACAA1-219ENST00000625927 ROMO1P60602 79 aa9.53□□□□□ -0.88
ACAA1-219ENST00000625927 USH2AO75445 5202 aa9.5□□□□□ -0.89
ACAA1-219ENST00000625927 LCE2DQ5TA82 110 aaPredicted RBP9.48□□□□□ -0.89
ACAA1-219ENST00000625927 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
ACAA1-219ENST00000625927 MT1XP80297 61 aa9.4□□□□□ -0.91
ACAA1-219ENST00000625927 KRTAP10-5P60370 271 aa9.38□□□□□ -0.91
ACAA1-219ENST00000625927 KTN1-AS1Q86SY8 53 aa9.35□□□□□ -0.91
ACAA1-219ENST00000625927 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
ACAA1-219ENST00000625927 PRAC1Q96KF2 57 aa9.26□□□□□ -0.93
ACAA1-219ENST00000625927 FSIP2Q5CZC0 6907 aa9.22□□□□□ -0.93
ACAA1-219ENST00000625927 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
ACAA1-219ENST00000625927 SSPOA2VEC9 5147 aa9.21□□□□□ -0.94
ACAA1-219ENST00000625927 TNP1P09430 55 aa9.19□□□□□ -0.94
ACAA1-219ENST00000625927 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
ACAA1-219ENST00000625927 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
ACAA1-219ENST00000625927 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
ACAA1-219ENST00000625927 SVIPQ8NHG7 77 aa8.91□□□□□ -0.98
ACAA1-219ENST00000625927 KRTAP10-12P60413 245 aa8.9□□□□□ -0.98
ACAA1-219ENST00000625927 CRCT1Q9UGL9 99 aa8.87□□□□□ -0.99
ACAA1-219ENST00000625927 LCE3AQ5TA76 89 aa8.86□□□□□ -0.99
ACAA1-219ENST00000625927 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
ACAA1-219ENST00000625927 PP632Q6XCG6 107 aa8.81□□□□□ -1
ACAA1-219ENST00000625927 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
ACAA1-219ENST00000625927 KRTAP4-8A0A0G2JLE6 195 aa8.73□□□□□ -1.01
ACAA1-219ENST00000625927 KRTAP4-8Q9BYQ9 185 aa8.73□□□□□ -1.01
ACAA1-219ENST00000625927 KMT2DO14686 5537 aa8.7□□□□□ -1.02
ACAA1-219ENST00000625927 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.03
ACAA1-219ENST00000625927 KRTAP9-6A0A140TA67 174 aa8.58□□□□□ -1.04
ACAA1-219ENST00000625927 KRTAP19-5Q3LI72 72 aa8.5□□□□□ -1.05
ACAA1-219ENST00000625927 KRTAP12-3P60328 96 aa8.48□□□□□ -1.05
ACAA1-219ENST00000625927 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
ACAA1-219ENST00000625927 KRTAP19-7Q3SYF9 63 aa8.38□□□□□ -1.07
ACAA1-219ENST00000625927 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
ACAA1-219ENST00000625927 SYNE2Q8WXH0 6885 aaKnown RBP8.24□□□□□ -1.09
ACAA1-219ENST00000625927 MT1EP04732 61 aa8.24□□□□□ -1.09
ACAA1-219ENST00000625927 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
ACAA1-219ENST00000625927 SPRR2FQ96RM1 72 aa8.19□□□□□ -1.1
ACAA1-219ENST00000625927 MT1LQ93083 61 aa8.06□□□□□ -1.12
ACAA1-219ENST00000625927 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
ACAA1-219ENST00000625927 MUC12Q9UKN1 5478 aa8.03□□□□□ -1.12
ACAA1-219ENST00000625927 KRTAP6-3Q3LI67 103 aa7.97□□□□□ -1.13
ACAA1-219ENST00000625927 KRTAP19-3Q7Z4W3 81 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms