RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SPRR2BP35325 72 aa6.4□□□□□ -1.38
SNX1-214ENST00000625244 SPRR2AP35326 72 aa6.4□□□□□ -1.38
SNX1-214ENST00000625244 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
SNX1-214ENST00000625244 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
SNX1-214ENST00000625244 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
SNX1-214ENST00000625244 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
SNX1-214ENST00000625244 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
SNX1-214ENST00000625244 Q5W150 140 aa6.35□□□□□ -1.39
SNX1-214ENST00000625244 A0A087WVE0 104 aa6.34□□□□□ -1.39
SNX1-214ENST00000625244 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
SNX1-214ENST00000625244 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
SNX1-214ENST00000625244 UQCRQO14949 82 aa6.3□□□□□ -1.4
SNX1-214ENST00000625244 Q5VV11 94 aa6.3□□□□□ -1.4
SNX1-214ENST00000625244 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
SNX1-214ENST00000625244 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
SNX1-214ENST00000625244 ATOX1O00244 68 aa6.26□□□□□ -1.41
SNX1-214ENST00000625244 LOC101927531A0A1B0GV80 90 aa6.24□□□□□ -1.41
SNX1-214ENST00000625244 H0Y9P7 68 aa6.24□□□□□ -1.41
SNX1-214ENST00000625244 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
SNX1-214ENST00000625244 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
SNX1-214ENST00000625244 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
SNX1-214ENST00000625244 MP68P56378 58 aa6.21□□□□□ -1.42
SNX1-214ENST00000625244 SPRR2DP22532 72 aa6.19□□□□□ -1.42
SNX1-214ENST00000625244 C4orf26Q17RF5 130 aa6.19□□□□□ -1.42
SNX1-214ENST00000625244 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
SNX1-214ENST00000625244 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
SNX1-214ENST00000625244 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
SNX1-214ENST00000625244 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
SNX1-214ENST00000625244 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
SNX1-214ENST00000625244 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
SNX1-214ENST00000625244 FAM236AA0A1B0GUQ0 79 aa6.16□□□□□ -1.42
SNX1-214ENST00000625244 FAM236BA0A1B0GV22 79 aa6.16□□□□□ -1.42
SNX1-214ENST00000625244 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
SNX1-214ENST00000625244 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
SNX1-214ENST00000625244 LINC00208Q96KT6 92 aa6.15□□□□□ -1.42
SNX1-214ENST00000625244 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.42
SNX1-214ENST00000625244 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
SNX1-214ENST00000625244 H3BPC8 53 aa6.14□□□□□ -1.43
SNX1-214ENST00000625244 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
SNX1-214ENST00000625244 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
SNX1-214ENST00000625244 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
SNX1-214ENST00000625244 S4R3F8 94 aa6.04□□□□□ -1.44
SNX1-214ENST00000625244 A8MUN3 132 aa6.02□□□□□ -1.45
SNX1-214ENST00000625244 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
SNX1-214ENST00000625244 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
SNX1-214ENST00000625244 SERP2Q8N6R1 65 aa5.99□□□□□ -1.45
SNX1-214ENST00000625244 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
SNX1-214ENST00000625244 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
SNX1-214ENST00000625244 LCA10Q71F78 164 aa5.96□□□□□ -1.46
SNX1-214ENST00000625244 NDUFC1O43677 76 aa5.93□□□□□ -1.46
SNX1-214ENST00000625244 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
SNX1-214ENST00000625244 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
SNX1-214ENST00000625244 SNURFQ9Y675 71 aa5.92□□□□□ -1.46
SNX1-214ENST00000625244 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
SNX1-214ENST00000625244 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
SNX1-214ENST00000625244 COX7CP15954 63 aa5.88□□□□□ -1.47
SNX1-214ENST00000625244 ACYP2P14621 99 aa5.86□□□□□ -1.47
SNX1-214ENST00000625244 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
SNX1-214ENST00000625244 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SNX1-214ENST00000625244 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
SNX1-214ENST00000625244 MT1XP80297 61 aa5.82□□□□□ -1.48
SNX1-214ENST00000625244 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
SNX1-214ENST00000625244 AHNAK2Q8IVF2 5795 aa5.81□□□□□ -1.48
SNX1-214ENST00000625244 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
SNX1-214ENST00000625244 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
SNX1-214ENST00000625244 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
SNX1-214ENST00000625244 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SNX1-214ENST00000625244 H0YAA0 97 aa5.74□□□□□ -1.49
SNX1-214ENST00000625244 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
SNX1-214ENST00000625244 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
SNX1-214ENST00000625244 H7BZZ5 65 aa5.69□□□□□ -1.5
SNX1-214ENST00000625244 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
SNX1-214ENST00000625244 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
SNX1-214ENST00000625244 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
SNX1-214ENST00000625244 COA5Q86WW8 74 aa5.64□□□□□ -1.51
SNX1-214ENST00000625244 CYSTM1Q9H1C7 97 aa5.64□□□□□ -1.51
SNX1-214ENST00000625244 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
SNX1-214ENST00000625244 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
SNX1-214ENST00000625244 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
SNX1-214ENST00000625244 R4GN34 69 aa5.58□□□□□ -1.52
SNX1-214ENST00000625244 H3BS24 57 aa5.57□□□□□ -1.52
SNX1-214ENST00000625244 P0C880 135 aa5.56□□□□□ -1.52
SNX1-214ENST00000625244 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
SNX1-214ENST00000625244 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
SNX1-214ENST00000625244 M0QZ58 72 aa5.53□□□□□ -1.52
SNX1-214ENST00000625244 SEC61GP60059 68 aa5.53□□□□□ -1.52
SNX1-214ENST00000625244 TMEM258P61165 79 aa5.52□□□□□ -1.53
SNX1-214ENST00000625244 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
SNX1-214ENST00000625244 MT4P47944 62 aa5.5□□□□□ -1.53
SNX1-214ENST00000625244 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
SNX1-214ENST00000625244 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
SNX1-214ENST00000625244 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
SNX1-214ENST00000625244 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
SNX1-214ENST00000625244 A0A1B0GU69 56 aa5.4□□□□□ -1.54
SNX1-214ENST00000625244 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
SNX1-214ENST00000625244 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
SNX1-214ENST00000625244 A0A1B0GU33 70 aa5.34□□□□□ -1.55
SNX1-214ENST00000625244 PCP4P48539 62 aa5.32□□□□□ -1.56
SNX1-214ENST00000625244 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
SNX1-214ENST00000625244 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms