RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 Q5W150 140 aa4.83□□□□□ -1.64
LINC01560-202ENST00000624822 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
LINC01560-202ENST00000624822 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
LINC01560-202ENST00000624822 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
LINC01560-202ENST00000624822 TP53AIP1Q9HCN2 124 aa4.79□□□□□ -1.64
LINC01560-202ENST00000624822 COX7CP15954 63 aa4.77□□□□□ -1.65
LINC01560-202ENST00000624822 SERP2Q8N6R1 65 aa4.77□□□□□ -1.65
LINC01560-202ENST00000624822 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
LINC01560-202ENST00000624822 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
LINC01560-202ENST00000624822 UQCRQO14949 82 aa4.75□□□□□ -1.65
LINC01560-202ENST00000624822 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
LINC01560-202ENST00000624822 TRAV7A0A075B6U4 112 aa4.74□□□□□ -1.65
LINC01560-202ENST00000624822 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
LINC01560-202ENST00000624822 TRAV22A0A0B4J277 110 aa4.72□□□□□ -1.65
LINC01560-202ENST00000624822 C4orf26Q17RF5 130 aa4.71□□□□□ -1.66
LINC01560-202ENST00000624822 H1FX-AS1Q4G0G2 97 aa4.69□□□□□ -1.66
LINC01560-202ENST00000624822 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
LINC01560-202ENST00000624822 H0Y9P7 68 aa4.68□□□□□ -1.66
LINC01560-202ENST00000624822 C20orf197Q8N268 126 aa4.68□□□□□ -1.66
LINC01560-202ENST00000624822 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
LINC01560-202ENST00000624822 LOC101927531A0A1B0GV80 90 aa4.67□□□□□ -1.66
LINC01560-202ENST00000624822 CYP4F30PQ9H0H9 118 aa4.65□□□□□ -1.67
LINC01560-202ENST00000624822 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
LINC01560-202ENST00000624822 SNURFQ9Y675 71 aa4.65□□□□□ -1.67
LINC01560-202ENST00000624822 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
LINC01560-202ENST00000624822 MP68P56378 58 aa4.62□□□□□ -1.67
LINC01560-202ENST00000624822 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
LINC01560-202ENST00000624822 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
LINC01560-202ENST00000624822 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
LINC01560-202ENST00000624822 MT2AP02795 61 aa4.59□□□□□ -1.67
LINC01560-202ENST00000624822 TMEM258P61165 79 aa4.59□□□□□ -1.67
LINC01560-202ENST00000624822 S4R3F8 94 aa4.59□□□□□ -1.67
LINC01560-202ENST00000624822 H7BZZ5 65 aa4.58□□□□□ -1.68
LINC01560-202ENST00000624822 NDUFC1O43677 76 aa4.58□□□□□ -1.68
LINC01560-202ENST00000624822 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
LINC01560-202ENST00000624822 MT1FP04733 61 aa4.56□□□□□ -1.68
LINC01560-202ENST00000624822 H3BPC8 53 aa4.55□□□□□ -1.68
LINC01560-202ENST00000624822 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
LINC01560-202ENST00000624822 LCA10Q71F78 164 aa4.54□□□□□ -1.68
LINC01560-202ENST00000624822 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
LINC01560-202ENST00000624822 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
LINC01560-202ENST00000624822 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
LINC01560-202ENST00000624822 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
LINC01560-202ENST00000624822 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
LINC01560-202ENST00000624822 ATP5EP56381 51 aaPredicted RBP4.5□□□□□ -1.69
LINC01560-202ENST00000624822 A8MUN3 132 aa4.49□□□□□ -1.69
LINC01560-202ENST00000624822 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
LINC01560-202ENST00000624822 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
LINC01560-202ENST00000624822 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
LINC01560-202ENST00000624822 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
LINC01560-202ENST00000624822 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
LINC01560-202ENST00000624822 ACYP2P14621 99 aa4.37□□□□□ -1.71
LINC01560-202ENST00000624822 USH2AO75445 5202 aa4.37□□□□□ -1.71
LINC01560-202ENST00000624822 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
LINC01560-202ENST00000624822 H0YAA0 97 aa4.33□□□□□ -1.72
LINC01560-202ENST00000624822 ADM2Q7Z4H4 148 aa4.33□□□□□ -1.72
LINC01560-202ENST00000624822 COA5Q86WW8 74 aa4.33□□□□□ -1.72
LINC01560-202ENST00000624822 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
LINC01560-202ENST00000624822 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
LINC01560-202ENST00000624822 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
LINC01560-202ENST00000624822 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
LINC01560-202ENST00000624822 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
LINC01560-202ENST00000624822 Q5VV11 94 aa4.27□□□□□ -1.73
LINC01560-202ENST00000624822 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
LINC01560-202ENST00000624822 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
LINC01560-202ENST00000624822 P0C880 135 aa4.23□□□□□ -1.73
LINC01560-202ENST00000624822 Q1T7F1 81 aa4.23□□□□□ -1.73
LINC01560-202ENST00000624822 R4GN34 69 aa4.23□□□□□ -1.73
LINC01560-202ENST00000624822 MT1BP07438 61 aa4.22□□□□□ -1.73
LINC01560-202ENST00000624822 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
LINC01560-202ENST00000624822 V9GYY9 64 aa4.22□□□□□ -1.73
LINC01560-202ENST00000624822 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
LINC01560-202ENST00000624822 M0QZ58 72 aa4.2□□□□□ -1.74
LINC01560-202ENST00000624822 PSPHP1O15172 72 aa4.19□□□□□ -1.74
LINC01560-202ENST00000624822 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
LINC01560-202ENST00000624822 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
LINC01560-202ENST00000624822 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
LINC01560-202ENST00000624822 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
LINC01560-202ENST00000624822 A6NN06 94 aa4.16□□□□□ -1.74
LINC01560-202ENST00000624822 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
LINC01560-202ENST00000624822 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
LINC01560-202ENST00000624822 SEC61GP60059 68 aa4.11□□□□□ -1.75
LINC01560-202ENST00000624822 A0A1B0GU69 56 aa4.1□□□□□ -1.75
LINC01560-202ENST00000624822 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
LINC01560-202ENST00000624822 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
LINC01560-202ENST00000624822 A6NED7 52 aa4.06□□□□□ -1.76
LINC01560-202ENST00000624822 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
LINC01560-202ENST00000624822 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
LINC01560-202ENST00000624822 A0A1B0GU33 70 aa3.99□□□□□ -1.77
LINC01560-202ENST00000624822 MT1XP80297 61 aa3.99□□□□□ -1.77
LINC01560-202ENST00000624822 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
LINC01560-202ENST00000624822 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
LINC01560-202ENST00000624822 A8MU10 97 aa3.97□□□□□ -1.77
LINC01560-202ENST00000624822 UQCR11O14957 56 aa3.97□□□□□ -1.77
LINC01560-202ENST00000624822 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
LINC01560-202ENST00000624822 A0A0D9SG42 100 aa3.96□□□□□ -1.78
LINC01560-202ENST00000624822 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
LINC01560-202ENST00000624822 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
LINC01560-202ENST00000624822 NEBP20929 6669 aa3.95□□□□□ -1.78
LINC01560-202ENST00000624822 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms