RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
SOX9-AS1-217ENST00000623935 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
SOX9-AS1-217ENST00000623935 MP68P56378 58 aa4.59□□□□□ -1.67
SOX9-AS1-217ENST00000623935 ZCCHC13Q8WW36 166 aaKnown RBP4.59□□□□□ -1.67
SOX9-AS1-217ENST00000623935 HERC1Q15751 4861 aa4.58□□□□□ -1.68
SOX9-AS1-217ENST00000623935 TRAV22A0A0B4J277 110 aa4.58□□□□□ -1.68
SOX9-AS1-217ENST00000623935 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
SOX9-AS1-217ENST00000623935 H0Y9P7 68 aa4.57□□□□□ -1.68
SOX9-AS1-217ENST00000623935 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SOX9-AS1-217ENST00000623935 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
SOX9-AS1-217ENST00000623935 PSPHP1O15172 72 aa4.56□□□□□ -1.68
SOX9-AS1-217ENST00000623935 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
SOX9-AS1-217ENST00000623935 Q5W150 140 aa4.55□□□□□ -1.68
SOX9-AS1-217ENST00000623935 H3BPC8 53 aa4.54□□□□□ -1.68
SOX9-AS1-217ENST00000623935 LPAP08519 4548 aa4.53□□□□□ -1.68
SOX9-AS1-217ENST00000623935 LOC101927531A0A1B0GV80 90 aa4.53□□□□□ -1.69
SOX9-AS1-217ENST00000623935 C1orf64Q8NEQ6 169 aa4.53□□□□□ -1.69
SOX9-AS1-217ENST00000623935 LINC00208Q96KT6 92 aa4.53□□□□□ -1.69
SOX9-AS1-217ENST00000623935 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.69
SOX9-AS1-217ENST00000623935 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
SOX9-AS1-217ENST00000623935 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
SOX9-AS1-217ENST00000623935 C7orf65Q6ZTY9 151 aa4.52□□□□□ -1.69
SOX9-AS1-217ENST00000623935 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
SOX9-AS1-217ENST00000623935 SPINK7P58062 85 aa4.49□□□□□ -1.69
SOX9-AS1-217ENST00000623935 LRP2P98164 4655 aa4.48□□□□□ -1.69
SOX9-AS1-217ENST00000623935 CYP4F30PQ9H0H9 118 aa4.48□□□□□ -1.69
SOX9-AS1-217ENST00000623935 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
SOX9-AS1-217ENST00000623935 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
SOX9-AS1-217ENST00000623935 HRES1P13985 223 aa4.4□□□□□ -1.71
SOX9-AS1-217ENST00000623935 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
SOX9-AS1-217ENST00000623935 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
SOX9-AS1-217ENST00000623935 Q1T7F1 81 aa4.36□□□□□ -1.71
SOX9-AS1-217ENST00000623935 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
SOX9-AS1-217ENST00000623935 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
SOX9-AS1-217ENST00000623935 A8MUN3 132 aa4.35□□□□□ -1.71
SOX9-AS1-217ENST00000623935 ACYP2P14621 99 aa4.31□□□□□ -1.72
SOX9-AS1-217ENST00000623935 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
SOX9-AS1-217ENST00000623935 DMAC1Q96GE9 116 aa4.31□□□□□ -1.72
SOX9-AS1-217ENST00000623935 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
SOX9-AS1-217ENST00000623935 MUC2Q02817 5179 aa4.3□□□□□ -1.72
SOX9-AS1-217ENST00000623935 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
SOX9-AS1-217ENST00000623935 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
SOX9-AS1-217ENST00000623935 COA5Q86WW8 74 aa4.28□□□□□ -1.72
SOX9-AS1-217ENST00000623935 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
SOX9-AS1-217ENST00000623935 S4R3F8 94 aa4.25□□□□□ -1.73
SOX9-AS1-217ENST00000623935 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
SOX9-AS1-217ENST00000623935 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
SOX9-AS1-217ENST00000623935 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
SOX9-AS1-217ENST00000623935 Q5VV11 94 aa4.2□□□□□ -1.74
SOX9-AS1-217ENST00000623935 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
SOX9-AS1-217ENST00000623935 M0R2T5 61 aa4.19□□□□□ -1.74
SOX9-AS1-217ENST00000623935 LCA10Q71F78 164 aa4.19□□□□□ -1.74
SOX9-AS1-217ENST00000623935 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
SOX9-AS1-217ENST00000623935 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
SOX9-AS1-217ENST00000623935 A6NED7 52 aa4.15□□□□□ -1.74
SOX9-AS1-217ENST00000623935 MT1HP80294 61 aa4.14□□□□□ -1.75
SOX9-AS1-217ENST00000623935 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
SOX9-AS1-217ENST00000623935 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
SOX9-AS1-217ENST00000623935 A6NN06 94 aa4.12□□□□□ -1.75
SOX9-AS1-217ENST00000623935 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
SOX9-AS1-217ENST00000623935 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
SOX9-AS1-217ENST00000623935 K7ERS5 55 aa4.11□□□□□ -1.75
SOX9-AS1-217ENST00000623935 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.75
SOX9-AS1-217ENST00000623935 A0A1B0GU69 56 aa4.07□□□□□ -1.76
SOX9-AS1-217ENST00000623935 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
SOX9-AS1-217ENST00000623935 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
SOX9-AS1-217ENST00000623935 H0YAA0 97 aa4.05□□□□□ -1.76
SOX9-AS1-217ENST00000623935 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
SOX9-AS1-217ENST00000623935 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
SOX9-AS1-217ENST00000623935 A8MU10 97 aa4.01□□□□□ -1.77
SOX9-AS1-217ENST00000623935 UQCR11O14957 56 aa4.01□□□□□ -1.77
SOX9-AS1-217ENST00000623935 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
SOX9-AS1-217ENST00000623935 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
SOX9-AS1-217ENST00000623935 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
SOX9-AS1-217ENST00000623935 P0C880 135 aa3.95□□□□□ -1.78
SOX9-AS1-217ENST00000623935 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
SOX9-AS1-217ENST00000623935 MT2AP02795 61 aa3.94□□□□□ -1.78
SOX9-AS1-217ENST00000623935 A0A1B0GU33 70 aa3.93□□□□□ -1.78
SOX9-AS1-217ENST00000623935 R4GN34 69 aa3.93□□□□□ -1.78
SOX9-AS1-217ENST00000623935 M0QZ58 72 aa3.91□□□□□ -1.78
SOX9-AS1-217ENST00000623935 MT1FP04733 61 aa3.91□□□□□ -1.78
SOX9-AS1-217ENST00000623935 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
SOX9-AS1-217ENST00000623935 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
SOX9-AS1-217ENST00000623935 A0A0D9SG42 100 aa3.79□□□□□ -1.8
SOX9-AS1-217ENST00000623935 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SOX9-AS1-217ENST00000623935 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
SOX9-AS1-217ENST00000623935 ROMO1P60602 79 aa3.75□□□□□ -1.81
SOX9-AS1-217ENST00000623935 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
SOX9-AS1-217ENST00000623935 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
SOX9-AS1-217ENST00000623935 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
SOX9-AS1-217ENST00000623935 MT1BP07438 61 aa3.68□□□□□ -1.82
SOX9-AS1-217ENST00000623935 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
SOX9-AS1-217ENST00000623935 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
SOX9-AS1-217ENST00000623935 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.82
SOX9-AS1-217ENST00000623935 USH2AO75445 5202 aa3.64□□□□□ -1.83
SOX9-AS1-217ENST00000623935 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
SOX9-AS1-217ENST00000623935 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
SOX9-AS1-217ENST00000623935 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SOX9-AS1-217ENST00000623935 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
SOX9-AS1-217ENST00000623935 MT1XP80297 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms