RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
ATRX-211ENST00000623321 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
ATRX-211ENST00000623321 UQCR11O14957 56 aa8.13□□□□□ -1.11
ATRX-211ENST00000623321 A8MUU9 505 aa8.13□□□□□ -1.11
ATRX-211ENST00000623321 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
ATRX-211ENST00000623321 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
ATRX-211ENST00000623321 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
ATRX-211ENST00000623321 XP32Q5T750 250 aa8.06□□□□□ -1.12
ATRX-211ENST00000623321 RPL37P61927 97 aaKnown RBP8.02□□□□□ -1.13
ATRX-211ENST00000623321 HERC1Q15751 4861 aa7.96□□□□□ -1.14
ATRX-211ENST00000623321 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
ATRX-211ENST00000623321 LPAP08519 4548 aa7.93□□□□□ -1.14
ATRX-211ENST00000623321 PRAC1Q96KF2 57 aa7.9□□□□□ -1.14
ATRX-211ENST00000623321 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
ATRX-211ENST00000623321 LRP2P98164 4655 aa7.87□□□□□ -1.15
ATRX-211ENST00000623321 H0YAA0 97 aa7.85□□□□□ -1.15
ATRX-211ENST00000623321 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
ATRX-211ENST00000623321 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
ATRX-211ENST00000623321 A0A1B0GU33 70 aa7.81□□□□□ -1.16
ATRX-211ENST00000623321 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
ATRX-211ENST00000623321 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
ATRX-211ENST00000623321 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
ATRX-211ENST00000623321 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
ATRX-211ENST00000623321 MUC17Q685J3 4493 aa7.67□□□□□ -1.18
ATRX-211ENST00000623321 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
ATRX-211ENST00000623321 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
ATRX-211ENST00000623321 K7ERS5 55 aa7.58□□□□□ -1.2
ATRX-211ENST00000623321 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
ATRX-211ENST00000623321 S4R3F8 94 aa7.55□□□□□ -1.2
ATRX-211ENST00000623321 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
ATRX-211ENST00000623321 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
ATRX-211ENST00000623321 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
ATRX-211ENST00000623321 MUC2Q02817 5179 aa7.45□□□□□ -1.22
ATRX-211ENST00000623321 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
ATRX-211ENST00000623321 ROMO1P60602 79 aa7.42□□□□□ -1.22
ATRX-211ENST00000623321 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
ATRX-211ENST00000623321 P0C880 135 aa7.38□□□□□ -1.23
ATRX-211ENST00000623321 A0A0D9SG42 100 aa7.37□□□□□ -1.23
ATRX-211ENST00000623321 H3BS24 57 aa7.36□□□□□ -1.23
ATRX-211ENST00000623321 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
ATRX-211ENST00000623321 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
ATRX-211ENST00000623321 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
ATRX-211ENST00000623321 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
ATRX-211ENST00000623321 M0QZ58 72 aa7.21□□□□□ -1.26
ATRX-211ENST00000623321 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
ATRX-211ENST00000623321 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
ATRX-211ENST00000623321 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
ATRX-211ENST00000623321 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
ATRX-211ENST00000623321 MT1HP80294 61 aa7.13□□□□□ -1.27
ATRX-211ENST00000623321 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
ATRX-211ENST00000623321 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.28
ATRX-211ENST00000623321 M0R2T5 61 aa7.08□□□□□ -1.28
ATRX-211ENST00000623321 R4GN34 69 aa6.98□□□□□ -1.29
ATRX-211ENST00000623321 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
ATRX-211ENST00000623321 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
ATRX-211ENST00000623321 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
ATRX-211ENST00000623321 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
ATRX-211ENST00000623321 MT2AP02795 61 aa6.84□□□□□ -1.31
ATRX-211ENST00000623321 MT1FP04733 61 aa6.79□□□□□ -1.32
ATRX-211ENST00000623321 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
ATRX-211ENST00000623321 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
ATRX-211ENST00000623321 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
ATRX-211ENST00000623321 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
ATRX-211ENST00000623321 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
ATRX-211ENST00000623321 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
ATRX-211ENST00000623321 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
ATRX-211ENST00000623321 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
ATRX-211ENST00000623321 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
ATRX-211ENST00000623321 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
ATRX-211ENST00000623321 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
ATRX-211ENST00000623321 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
ATRX-211ENST00000623321 LCE2BO14633 110 aa6.44□□□□□ -1.38
ATRX-211ENST00000623321 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
ATRX-211ENST00000623321 MT1BP07438 61 aa6.42□□□□□ -1.38
ATRX-211ENST00000623321 TNP1P09430 55 aa6.41□□□□□ -1.38
ATRX-211ENST00000623321 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
ATRX-211ENST00000623321 USH2AO75445 5202 aa6.25□□□□□ -1.41
ATRX-211ENST00000623321 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
ATRX-211ENST00000623321 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
ATRX-211ENST00000623321 MT1XP80297 61 aa6.19□□□□□ -1.42
ATRX-211ENST00000623321 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
ATRX-211ENST00000623321 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
ATRX-211ENST00000623321 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
ATRX-211ENST00000623321 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
ATRX-211ENST00000623321 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
ATRX-211ENST00000623321 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
ATRX-211ENST00000623321 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
ATRX-211ENST00000623321 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.44
ATRX-211ENST00000623321 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
ATRX-211ENST00000623321 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
ATRX-211ENST00000623321 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
ATRX-211ENST00000623321 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
ATRX-211ENST00000623321 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
ATRX-211ENST00000623321 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
ATRX-211ENST00000623321 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
ATRX-211ENST00000623321 KMT2DO14686 5537 aa5.69□□□□□ -1.5
ATRX-211ENST00000623321 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
ATRX-211ENST00000623321 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
ATRX-211ENST00000623321 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
ATRX-211ENST00000623321 KRTAP19-7Q3SYF9 63 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms